Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.61■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.61■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.61■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Smad6-203ENSMUST00000179458 273 ntBASIC15.6■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.6■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav15d-1-dv6d-1A0A075B624 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.58■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.57■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.56■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.56■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.56■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms