Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16d-dv11A0A075B617 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16d-dv11A0A075B617 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav16d-dv11A0A075B617 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16d-dv11A0A075B617 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16d-dv11A0A075B617 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Trav16d-dv11A0A075B617 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16d-dv11A0A075B617 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16d-dv11A0A075B617 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16d-dv11A0A075B617 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16d-dv11A0A075B617 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16d-dv11A0A075B617 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16d-dv11A0A075B617 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16d-dv11A0A075B617 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16d-dv11A0A075B617 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16d-dv11A0A075B617 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16d-dv11A0A075B617 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16d-dv11A0A075B617 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16d-dv11A0A075B617 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16d-dv11A0A075B617 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav16d-dv11A0A075B617 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav16d-dv11A0A075B617 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16d-dv11A0A075B617 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16d-dv11A0A075B617 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav16d-dv11A0A075B617 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16d-dv11A0A075B617 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16d-dv11A0A075B617 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16d-dv11A0A075B617 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16d-dv11A0A075B617 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16d-dv11A0A075B617 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav16d-dv11A0A075B617 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16d-dv11A0A075B617 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16d-dv11A0A075B617 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16d-dv11A0A075B617 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC13.48□□□□□ -0.25
Trav16d-dv11A0A075B617 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav16d-dv11A0A075B617 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16d-dv11A0A075B617 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16d-dv11A0A075B617 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16d-dv11A0A075B617 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav16d-dv11A0A075B617 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav16d-dv11A0A075B617 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16d-dv11A0A075B617 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16d-dv11A0A075B617 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16d-dv11A0A075B617 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16d-dv11A0A075B617 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16d-dv11A0A075B617 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16d-dv11A0A075B617 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav16d-dv11A0A075B617 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16d-dv11A0A075B617 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16d-dv11A0A075B617 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16d-dv11A0A075B617 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16d-dv11A0A075B617 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16d-dv11A0A075B617 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav16d-dv11A0A075B617 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16d-dv11A0A075B617 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16d-dv11A0A075B617 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16d-dv11A0A075B617 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16d-dv11A0A075B617 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav16d-dv11A0A075B617 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16d-dv11A0A075B617 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16d-dv11A0A075B617 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16d-dv11A0A075B617 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav16d-dv11A0A075B617 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16d-dv11A0A075B617 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16d-dv11A0A075B617 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16d-dv11A0A075B617 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16d-dv11A0A075B617 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.47□□□□□ -0.25
Trav16d-dv11A0A075B617 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16d-dv11A0A075B617 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16d-dv11A0A075B617 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16d-dv11A0A075B617 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16d-dv11A0A075B617 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16d-dv11A0A075B617 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16d-dv11A0A075B617 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.47□□□□□ -0.25
Trav16d-dv11A0A075B617 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16d-dv11A0A075B617 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16d-dv11A0A075B617 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav16d-dv11A0A075B617 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav16d-dv11A0A075B617 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Trav16d-dv11A0A075B617 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav16d-dv11A0A075B617 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav16d-dv11A0A075B617 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav16d-dv11A0A075B617 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav16d-dv11A0A075B617 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC13.46□□□□□ -0.25
Trav16d-dv11A0A075B617 Serp2-204ENSMUST00000228055 705 ntBASIC13.46□□□□□ -0.25
Trav16d-dv11A0A075B617 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav16d-dv11A0A075B617 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trav16d-dv11A0A075B617 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav16d-dv11A0A075B617 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav16d-dv11A0A075B617 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav16d-dv11A0A075B617 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav16d-dv11A0A075B617 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.46□□□□□ -0.26
Trav16d-dv11A0A075B617 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Trav16d-dv11A0A075B617 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.46□□□□□ -0.26
Trav16d-dv11A0A075B617 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav16d-dv11A0A075B617 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav16d-dv11A0A075B617 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16d-dv11A0A075B617 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.45□□□□□ -0.26
Trav16d-dv11A0A075B617 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Trav16d-dv11A0A075B617 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms