Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Gm4525-201ENSMUST00000198831 254 ntBASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Gm18907-201ENSMUST00000209719 932 ntBASIC8.4□□□□□ -1.06
Brf1Q8CFK2 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Gm18226-201ENSMUST00000215261 521 ntBASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Gm9315-201ENSMUST00000222696 908 ntBASIC8.4□□□□□ -1.06
Brf1Q8CFK2 AC164436.1-201ENSMUST00000227074 772 ntBASIC8.4□□□□□ -1.06
Brf1Q8CFK2 n-R5s169-201ENSMUST00000083110 120 ntBASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Gm24451-201ENSMUST00000083353 133 ntBASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Brf1Q8CFK2 AC135669.2-201ENSMUST00000215636 4958 ntBASIC8.4□□□□□ -1.07
Brf1Q8CFK2 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Brf1Q8CFK2 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Brf1Q8CFK2 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Brf1Q8CFK2 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Brf1Q8CFK2 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Brf1Q8CFK2 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.07
Brf1Q8CFK2 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Brf1Q8CFK2 Gm20749-201ENSMUST00000186319 3492 ntBASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Gm5361-201ENSMUST00000211041 1498 ntBASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Gm25311-201ENSMUST00000104136 132 ntBASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Gm13237-201ENSMUST00000122151 635 ntBASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Gm22728-201ENSMUST00000158087 129 ntBASIC8.39□□□□□ -1.07
Brf1Q8CFK2 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Gm17711-201ENSMUST00000172028 237 ntBASIC8.39□□□□□ -1.07
Brf1Q8CFK2 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC8.39□□□□□ -1.07
Brf1Q8CFK2 AC159188.3-201ENSMUST00000224199 880 ntBASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Brf1Q8CFK2 AC118639.1-203ENSMUST00000228425 2016 ntBASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Gm37080-201ENSMUST00000194804 2404 ntBASIC8.39□□□□□ -1.07
Brf1Q8CFK2 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Brf1Q8CFK2 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC8.38□□□□□ -1.07
Brf1Q8CFK2 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Brf1Q8CFK2 Gm18719-201ENSMUST00000196696 1413 ntBASIC8.38□□□□□ -1.07
Brf1Q8CFK2 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Brf1Q8CFK2 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Brf1Q8CFK2 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Brf1Q8CFK2 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Brf1Q8CFK2 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Brf1Q8CFK2 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Brf1Q8CFK2 Gm25396-201ENSMUST00000103981 133 ntBASIC8.38□□□□□ -1.07
Brf1Q8CFK2 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Brf1Q8CFK2 Gm11864-201ENSMUST00000116179 1220 ntBASIC8.38□□□□□ -1.07
Brf1Q8CFK2 Gm16113-201ENSMUST00000159629 372 ntBASIC8.38□□□□□ -1.07
Brf1Q8CFK2 Gm24756-201ENSMUST00000177002 96 ntBASIC8.38□□□□□ -1.07
Brf1Q8CFK2 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC8.38□□□□□ -1.07
Brf1Q8CFK2 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Brf1Q8CFK2 AC131117.2-202ENSMUST00000224539 547 ntBASIC8.38□□□□□ -1.07
Brf1Q8CFK2 AC154361.1-201ENSMUST00000225694 745 ntBASIC8.38□□□□□ -1.07
Brf1Q8CFK2 AC106830.2-201ENSMUST00000226624 943 ntBASIC8.38□□□□□ -1.07
Brf1Q8CFK2 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC8.38□□□□□ -1.07
Brf1Q8CFK2 Gm6166-201ENSMUST00000098689 409 ntBASIC8.38□□□□□ -1.07
Brf1Q8CFK2 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Brf1Q8CFK2 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
Brf1Q8CFK2 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Brf1Q8CFK2 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Brf1Q8CFK2 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Brf1Q8CFK2 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Brf1Q8CFK2 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Brf1Q8CFK2 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Brf1Q8CFK2 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 236.9 ms