Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 B020031H02Rik-201ENSMUST00000209977 3673 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Pcdhb7Q8CDY9 Tnfrsf19-202ENSMUST00000111236 3958 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Gm43328-201ENSMUST00000198544 1434 ntBASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 AC159264.1-202ENSMUST00000224856 3162 ntBASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Zscan21-205ENSMUST00000110961 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Gm45262-201ENSMUST00000209917 1463 ntBASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Cks1brt-202ENSMUST00000211617 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Prom1-202ENSMUST00000074113 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Olfr806-202ENSMUST00000213239 3724 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Gm7739-201ENSMUST00000221131 1560 ntBASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Prnd-204ENSMUST00000110172 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Gm11875-201ENSMUST00000118187 799 ntBASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Gm12807-201ENSMUST00000121546 962 ntBASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Gm12368-201ENSMUST00000122251 434 ntBASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Gm14089-201ENSMUST00000130025 318 ntTSL 3 BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 1700003M07Rik-201ENSMUST00000139884 541 ntTSL 2 BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Gm24039-201ENSMUST00000157878 132 ntBASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Gm17205-201ENSMUST00000168370 1207 ntBASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Gm8877-201ENSMUST00000172657 655 ntBASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Olfr754-ps1-201ENSMUST00000173181 911 ntBASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Gm8868-201ENSMUST00000173591 577 ntBASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Rpl22l1-206ENSMUST00000194649 525 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Gm36932-201ENSMUST00000195226 929 ntBASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Gm43743-202ENSMUST00000198353 491 ntBASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Gm5554-201ENSMUST00000199726 1206 ntBASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Rarres2-204ENSMUST00000204267 795 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Rarres2-205ENSMUST00000204930 681 ntAPPRIS P3 TSL 2 BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 CT030709.1-201ENSMUST00000214443 443 ntTSL 5 BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 AC137127.2-201ENSMUST00000215086 935 ntTSL 5 BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Gm8512-201ENSMUST00000215367 471 ntBASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Gm7727-201ENSMUST00000219830 671 ntBASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Gm30155-201ENSMUST00000223458 339 ntBASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Gnpnat1-202ENSMUST00000226276 710 ntBASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 4930553J12Rik-201ENSMUST00000023648 381 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Mrgprx1-201ENSMUST00000094390 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Olfr659-201ENSMUST00000098170 969 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Gm37334-201ENSMUST00000192325 2938 ntBASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Gm14404-201ENSMUST00000119117 1660 ntBASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Nip7-201ENSMUST00000034392 3036 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Gm18259-201ENSMUST00000220991 2010 ntBASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Prom1-204ENSMUST00000087442 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Gm5975-201ENSMUST00000185256 1399 ntBASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 Tmem52b-201ENSMUST00000032263 2877 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Pcdhb7Q8CDY9 AC132467.1-201ENSMUST00000226498 1845 ntBASIC8.19□□□□□ -1.1
Pcdhb7Q8CDY9 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Pcdhb7Q8CDY9 Lrrc1-201ENSMUST00000113421 2630 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Pcdhb7Q8CDY9 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Pcdhb7Q8CDY9 Morf4l2-214ENSMUST00000166930 1926 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
Pcdhb7Q8CDY9 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Pcdhb7Q8CDY9 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Pcdhb7Q8CDY9 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Pcdhb7Q8CDY9 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Pcdhb7Q8CDY9 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Pcdhb7Q8CDY9 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Pcdhb7Q8CDY9 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Pcdhb7Q8CDY9 Gm6418-201ENSMUST00000118325 3577 ntBASIC8.19□□□□□ -1.1
Pcdhb7Q8CDY9 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Pcdhb7Q8CDY9 Gm44255-201ENSMUST00000203456 2053 ntBASIC8.19□□□□□ -1.1
Pcdhb7Q8CDY9 Ighv5-6-201ENSMUST00000103446 353 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Pcdhb7Q8CDY9 Swi5-202ENSMUST00000113395 712 ntAPPRIS P3 TSL 5 BASIC8.19□□□□□ -1.1
Pcdhb7Q8CDY9 Rhox4c-201ENSMUST00000115183 903 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Pcdhb7Q8CDY9 Gm8832-201ENSMUST00000119890 395 ntBASIC8.19□□□□□ -1.1
Pcdhb7Q8CDY9 Gm15220-201ENSMUST00000120730 379 ntBASIC8.19□□□□□ -1.1
Pcdhb7Q8CDY9 Gm8084-201ENSMUST00000120807 752 ntBASIC8.19□□□□□ -1.1
Pcdhb7Q8CDY9 Gm15596-201ENSMUST00000121139 784 ntBASIC8.19□□□□□ -1.1
Pcdhb7Q8CDY9 Gm11385-201ENSMUST00000121513 570 ntBASIC8.19□□□□□ -1.1
Pcdhb7Q8CDY9 Gm11760-201ENSMUST00000122355 796 ntBASIC8.19□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms