Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm37459-201ENSMUST00000192259 2840 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 Ubap2l-208ENSMUST00000196843 3975 ntTSL 5 BASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm17076-201ENSMUST00000165185 1401 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 Epb41l2-202ENSMUST00000092645 4280 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Trim35Q8C006 Blnk-202ENSMUST00000117695 1701 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 B3galt5-202ENSMUST00000113800 5282 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 Plec-207ENSMUST00000076442 15439 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 Pcdh15-216ENSMUST00000131724 6322 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Trim35Q8C006 Acer2-201ENSMUST00000045224 4216 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 Tifab-202ENSMUST00000225063 2718 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm42444-201ENSMUST00000199366 4558 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 Lyn-202ENSMUST00000103010 3387 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 Nrf1-205ENSMUST00000115200 2491 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 AC102847.1-201ENSMUST00000228390 2498 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 Tecpr2-201ENSMUST00000165978 7778 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm36958-201ENSMUST00000192388 1875 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 Scn3b-206ENSMUST00000176185 4090 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 D5Ertd579e-201ENSMUST00000031091 6677 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trim35Q8C006 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm23701-201ENSMUST00000103893 110 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm14570-201ENSMUST00000119444 391 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm14364-201ENSMUST00000129209 267 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm25339-201ENSMUST00000157458 232 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm26041-201ENSMUST00000158148 108 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm23197-201ENSMUST00000158809 112 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 1700112D23Rik-201ENSMUST00000167704 546 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm21976-202ENSMUST00000180066 831 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm7952-201ENSMUST00000180540 984 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm17797-201ENSMUST00000182175 997 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm7516-201ENSMUST00000186198 706 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm6644-201ENSMUST00000186507 951 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm43114-201ENSMUST00000198298 343 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm30652-201ENSMUST00000199103 430 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 4930515G16Rik-201ENSMUST00000199440 1256 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm19177-201ENSMUST00000204520 613 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm45081-201ENSMUST00000206281 572 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm44543-201ENSMUST00000209136 396 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 Olfr960-203ENSMUST00000216584 1148 ntAPPRIS ALT2 TSL 3 BASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm18670-201ENSMUST00000218712 696 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 AC167222.2-201ENSMUST00000220014 295 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 AC174776.1-201ENSMUST00000221509 405 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 AC174776.2-201ENSMUST00000222561 405 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 AC102327.1-201ENSMUST00000226389 742 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 AC133156.1-202ENSMUST00000227284 363 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm4017-201ENSMUST00000084813 338 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm26773-201ENSMUST00000180772 2868 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 Dock9-206ENSMUST00000212181 7368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 Eapp-204ENSMUST00000161592 4186 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm43813-201ENSMUST00000196847 2294 ntTSL 5 BASIC9.73□□□□□ -0.85
Trim35Q8C006 Cdh23-202ENSMUST00000105461 11096 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Trim35Q8C006 Fgd3-202ENSMUST00000110086 2628 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 Cyfip2-202ENSMUST00000093166 6298 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 AC139845.1-201ENSMUST00000147013 1334 ntTSL 5 BASIC9.73□□□□□ -0.85
Trim35Q8C006 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 Creb5-201ENSMUST00000047450 2330 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Trim35Q8C006 Efcab6-207ENSMUST00000156187 5012 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 Dgki-201ENSMUST00000042075 3028 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Trim35Q8C006 Ugt8a-201ENSMUST00000057944 3740 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 Pde6a-201ENSMUST00000025468 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 2900026A02Rik-202ENSMUST00000211733 10238 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Trim35Q8C006 Slc25a13-201ENSMUST00000015256 3067 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 Zmym6-202ENSMUST00000094713 3922 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 Cdh8-205ENSMUST00000142475 3216 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm37968-201ENSMUST00000195131 3201 ntBASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm10608-201ENSMUST00000093527 2509 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Trim35Q8C006 Kif26b-202ENSMUST00000161017 13749 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 Tulp2-209ENSMUST00000210813 2153 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 Hmgcs2-201ENSMUST00000090746 3290 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim35Q8C006 Gm18248-201ENSMUST00000191164 1846 ntBASIC9.72□□□□□ -0.85
Trim35Q8C006 Vnn3-201ENSMUST00000020190 1811 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim35Q8C006 Ttc16-205ENSMUST00000161089 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim35Q8C006 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim35Q8C006 Polr1a-201ENSMUST00000055296 9216 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim35Q8C006 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim35Q8C006 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC9.72□□□□□ -0.85
Trim35Q8C006 Gm44950-201ENSMUST00000206403 2296 ntBASIC9.72□□□□□ -0.85
Trim35Q8C006 Idi2-201ENSMUST00000038598 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim35Q8C006 Utp6-201ENSMUST00000043152 3877 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim35Q8C006 Dcdc2a-202ENSMUST00000069614 6634 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim35Q8C006 Gm37244-201ENSMUST00000191748 1981 ntBASIC9.72□□□□□ -0.85
Trim35Q8C006 Gm20735-201ENSMUST00000212077 1979 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trim35Q8C006 Olfr1278-206ENSMUST00000216229 6819 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trim35Q8C006 Fhad1-203ENSMUST00000105780 4809 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trim35Q8C006 Gm19445-201ENSMUST00000193649 2438 ntBASIC9.72□□□□□ -0.85
Trim35Q8C006 Wdr77-201ENSMUST00000010278 3682 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim35Q8C006 Ing5-201ENSMUST00000027505 4533 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim35Q8C006 Mcph1-205ENSMUST00000146819 2067 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trim35Q8C006 Gm37652-201ENSMUST00000195290 2095 ntBASIC9.72□□□□□ -0.85
Trim35Q8C006 Pitrm1-201ENSMUST00000021611 3318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim35Q8C006 Naca-202ENSMUST00000092048 6745 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trim35Q8C006 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC9.72□□□□□ -0.85
Trim35Q8C006 Mir181d-201ENSMUST00000102383 72 ntBASIC9.72□□□□□ -0.85
Trim35Q8C006 1700001P01Rik-201ENSMUST00000107576 624 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim35Q8C006 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC9.72□□□□□ -0.85
Trim35Q8C006 Prokr2-202ENSMUST00000110156 3829 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms