Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 AL603745.1-201ENSMUST00000215473 532 ntBASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 AC118006.3-201ENSMUST00000223948 1176 ntBASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 AC161252.2-201ENSMUST00000224978 374 ntBASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 AC125087.1-201ENSMUST00000227552 514 ntBASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 AC154806.5-205ENSMUST00000228828 411 ntBASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Snora9-201ENSMUST00000082579 133 ntBASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 n-R5s60-201ENSMUST00000083299 119 ntBASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Gm22865-201ENSMUST00000083949 214 ntBASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Gm43363-201ENSMUST00000201590 2647 ntBASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Gm10773-201ENSMUST00000218071 3935 ntBASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 AC154522.1-201ENSMUST00000224647 1903 ntBASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ccdc40Q8BI79 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 AC126549.1-201ENSMUST00000225044 3687 ntBASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Gm29670-201ENSMUST00000190228 2491 ntBASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 CT009604.1-201ENSMUST00000223900 1328 ntBASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Gm22671-201ENSMUST00000104420 134 ntBASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Gm12754-201ENSMUST00000121908 454 ntBASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Gm10913-201ENSMUST00000133732 463 ntBASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Gm37977-201ENSMUST00000193096 721 ntBASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Gm3103-201ENSMUST00000198073 752 ntBASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Gm43812-202ENSMUST00000202701 581 ntBASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Gm44823-201ENSMUST00000204775 1107 ntBASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Gm29977-201ENSMUST00000206804 724 ntBASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Gm8804-201ENSMUST00000212292 798 ntBASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 AC091783.3-201ENSMUST00000223969 681 ntBASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Gm25852-201ENSMUST00000082790 130 ntBASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 AC113031.7-201ENSMUST00000228609 1928 ntBASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ccdc40Q8BI79 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Ccdc40Q8BI79 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC7.35□□□□□ -1.23
Ccdc40Q8BI79 Gm12346-201ENSMUST00000121455 2255 ntBASIC7.35□□□□□ -1.23
Ccdc40Q8BI79 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Ccdc40Q8BI79 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Ccdc40Q8BI79 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ccdc40Q8BI79 Gm6866-201ENSMUST00000188559 2549 ntBASIC7.35□□□□□ -1.23
Ccdc40Q8BI79 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ccdc40Q8BI79 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ccdc40Q8BI79 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ccdc40Q8BI79 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ccdc40Q8BI79 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC7.35□□□□□ -1.23
Ccdc40Q8BI79 Gm24986-201ENSMUST00000104452 132 ntBASIC7.35□□□□□ -1.23
Ccdc40Q8BI79 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Ccdc40Q8BI79 Gm13940-201ENSMUST00000121023 301 ntBASIC7.35□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms