Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ClpbQ60649 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
ClpbQ60649 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ClpbQ60649 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC6.8□□□□□ -1.32
ClpbQ60649 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
ClpbQ60649 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC6.8□□□□□ -1.32
ClpbQ60649 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ClpbQ60649 Gm29369-201ENSMUST00000190674 615 ntBASIC6.8□□□□□ -1.32
ClpbQ60649 Gm37689-201ENSMUST00000193139 275 ntBASIC6.8□□□□□ -1.32
ClpbQ60649 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC6.8□□□□□ -1.32
ClpbQ60649 Gm37319-201ENSMUST00000193500 636 ntBASIC6.8□□□□□ -1.32
ClpbQ60649 Gm18593-201ENSMUST00000200754 1139 ntBASIC6.8□□□□□ -1.32
ClpbQ60649 Gm42581-201ENSMUST00000201774 966 ntBASIC6.8□□□□□ -1.32
ClpbQ60649 Gm43748-201ENSMUST00000202329 1233 ntBASIC6.8□□□□□ -1.32
ClpbQ60649 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC6.8□□□□□ -1.32
ClpbQ60649 Gm44566-201ENSMUST00000207638 304 ntBASIC6.8□□□□□ -1.32
ClpbQ60649 AC133948.2-201ENSMUST00000217850 378 ntBASIC6.8□□□□□ -1.32
ClpbQ60649 AC127224.1-201ENSMUST00000218094 453 ntBASIC6.8□□□□□ -1.32
ClpbQ60649 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC6.8□□□□□ -1.32
ClpbQ60649 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC6.8□□□□□ -1.32
ClpbQ60649 AC156574.1-201ENSMUST00000227084 452 ntBASIC6.8□□□□□ -1.32
ClpbQ60649 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
ClpbQ60649 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
ClpbQ60649 AC122828.2-201ENSMUST00000222511 2880 ntBASIC6.8□□□□□ -1.32
ClpbQ60649 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ClpbQ60649 AC111010.1-203ENSMUST00000227287 1548 ntBASIC6.8□□□□□ -1.32
ClpbQ60649 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC6.8□□□□□ -1.32
ClpbQ60649 AC154747.4-203ENSMUST00000225893 1384 ntBASIC6.8□□□□□ -1.32
ClpbQ60649 AC140393.3-201ENSMUST00000228396 1352 ntBASIC6.8□□□□□ -1.32
ClpbQ60649 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ClpbQ60649 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ClpbQ60649 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
ClpbQ60649 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ClpbQ60649 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ClpbQ60649 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ClpbQ60649 Gm14762-201ENSMUST00000105109 1771 ntBASIC6.8□□□□□ -1.32
ClpbQ60649 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC6.8□□□□□ -1.32
ClpbQ60649 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ClpbQ60649 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
ClpbQ60649 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ClpbQ60649 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC6.79□□□□□ -1.32
ClpbQ60649 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
ClpbQ60649 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ClpbQ60649 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
ClpbQ60649 AL450321.1-201ENSMUST00000220600 3550 ntBASIC6.79□□□□□ -1.32
ClpbQ60649 Gm14791-201ENSMUST00000119061 1166 ntBASIC6.79□□□□□ -1.32
ClpbQ60649 Gm8421-201ENSMUST00000119439 305 ntBASIC6.79□□□□□ -1.32
ClpbQ60649 Gm11653-201ENSMUST00000119992 1009 ntBASIC6.79□□□□□ -1.32
ClpbQ60649 Gm12321-201ENSMUST00000121485 804 ntBASIC6.79□□□□□ -1.32
ClpbQ60649 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC6.79□□□□□ -1.32
ClpbQ60649 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ClpbQ60649 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC6.79□□□□□ -1.32
ClpbQ60649 Mir199b-201ENSMUST00000175066 110 ntBASIC6.79□□□□□ -1.32
ClpbQ60649 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC6.79□□□□□ -1.32
ClpbQ60649 Gm18875-201ENSMUST00000188563 882 ntBASIC6.79□□□□□ -1.32
ClpbQ60649 Gm28952-201ENSMUST00000189285 681 ntBASIC6.79□□□□□ -1.32
ClpbQ60649 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.79□□□□□ -1.32
ClpbQ60649 Gm36928-201ENSMUST00000192466 694 ntBASIC6.79□□□□□ -1.32
ClpbQ60649 Gm37325-201ENSMUST00000194971 694 ntBASIC6.79□□□□□ -1.32
ClpbQ60649 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC6.79□□□□□ -1.32
ClpbQ60649 Gm8539-201ENSMUST00000199822 501 ntBASIC6.79□□□□□ -1.32
ClpbQ60649 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC6.79□□□□□ -1.32
ClpbQ60649 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC6.79□□□□□ -1.32
ClpbQ60649 Gm44982-201ENSMUST00000208795 471 ntBASIC6.79□□□□□ -1.32
ClpbQ60649 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ClpbQ60649 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
ClpbQ60649 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC6.79□□□□□ -1.32
ClpbQ60649 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ClpbQ60649 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ClpbQ60649 Gm24924-201ENSMUST00000084007 164 ntBASIC6.79□□□□□ -1.32
ClpbQ60649 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
ClpbQ60649 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.79□□□□□ -1.32
ClpbQ60649 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
ClpbQ60649 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
ClpbQ60649 Gm2108-201ENSMUST00000165058 2177 ntBASIC6.79□□□□□ -1.32
ClpbQ60649 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ClpbQ60649 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
ClpbQ60649 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ClpbQ60649 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
ClpbQ60649 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
ClpbQ60649 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
ClpbQ60649 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ClpbQ60649 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ClpbQ60649 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.79□□□□□ -1.32
ClpbQ60649 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ClpbQ60649 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ClpbQ60649 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ClpbQ60649 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
ClpbQ60649 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC6.79□□□□□ -1.32
ClpbQ60649 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
ClpbQ60649 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ClpbQ60649 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
ClpbQ60649 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC6.78□□□□□ -1.32
ClpbQ60649 Gm28240-201ENSMUST00000187560 2053 ntBASIC6.78□□□□□ -1.32
ClpbQ60649 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
ClpbQ60649 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ClpbQ60649 Gm42653-201ENSMUST00000200644 2839 ntBASIC6.78□□□□□ -1.32
ClpbQ60649 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
ClpbQ60649 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ClpbQ60649 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms