Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Gm24179-201ENSMUST00000158925 127 ntBASIC8.58□□□□□ -1.04
Shank3Q4ACU6 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Gm28620-201ENSMUST00000190463 439 ntBASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Gm42753-201ENSMUST00000196718 1268 ntBASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Gm9315-201ENSMUST00000222696 908 ntBASIC8.58□□□□□ -1.04
Shank3Q4ACU6 AV026068-216ENSMUST00000223874 328 ntBASIC8.58□□□□□ -1.04
Shank3Q4ACU6 AV026068-218ENSMUST00000223980 575 ntBASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Gm43422-201ENSMUST00000199780 3571 ntBASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Pcdh15-241ENSMUST00000195531 5241 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Wwp1-202ENSMUST00000108246 6440 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Gm43029-201ENSMUST00000201829 1535 ntBASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Hspbap1-201ENSMUST00000023555 4590 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Shank3Q4ACU6 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Gm7212-201ENSMUST00000120817 348 ntBASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Gm5970-201ENSMUST00000131638 1216 ntBASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Mir5107-201ENSMUST00000175586 88 ntBASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Gm4617-201ENSMUST00000178993 331 ntBASIC8.57□□□□□ -1.04
Shank3Q4ACU6 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Igkv12-67-201ENSMUST00000197806 354 ntBASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Gm5717-201ENSMUST00000198243 1062 ntBASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 AC123656.1-201ENSMUST00000227121 581 ntBASIC8.57□□□□□ -1.04
Shank3Q4ACU6 AC156016.2-201ENSMUST00000228200 525 ntBASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Ap3m1-206ENSMUST00000154460 6732 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Lig3-211ENSMUST00000173722 5797 ntAPPRIS P3 TSL 5 BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Olfr1246-202ENSMUST00000213221 5338 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Olfr1246-203ENSMUST00000217192 5301 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Gm31049-201ENSMUST00000201516 1302 ntBASIC8.57□□□□□ -1.04
Shank3Q4ACU6 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Slc2a9-203ENSMUST00000067886 3602 ntAPPRIS P4 TSL 1 (best) BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Gm43534-201ENSMUST00000197685 2853 ntBASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Amy2b-201ENSMUST00000120184 1577 ntBASIC8.57□□□□□ -1.04
Shank3Q4ACU6 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Gm23739-201ENSMUST00000102295 108 ntBASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Gm13451-201ENSMUST00000117649 592 ntBASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Gm14529-201ENSMUST00000117894 406 ntBASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Gm6446-201ENSMUST00000120604 818 ntBASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Gm28413-201ENSMUST00000189369 291 ntBASIC8.57□□□□□ -1.04
Shank3Q4ACU6 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Gm45026-201ENSMUST00000205292 833 ntBASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Gm17849-201ENSMUST00000219788 853 ntBASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Mir196a-1-201ENSMUST00000083612 102 ntBASIC8.57□□□□□ -1.04
Shank3Q4ACU6 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Shank3Q4ACU6 Hivep2-201ENSMUST00000015645 9763 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Gm37525-201ENSMUST00000193499 2871 ntBASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Arhgap32-206ENSMUST00000182802 5621 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Rrp12-201ENSMUST00000038677 4319 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Gm43637-201ENSMUST00000202206 2926 ntBASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Slc35b4-201ENSMUST00000019143 6253 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Gm42898-201ENSMUST00000200370 3073 ntBASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Gm12901-201ENSMUST00000118690 532 ntBASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Gm11976-201ENSMUST00000119236 295 ntBASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Gm22523-201ENSMUST00000158696 100 ntBASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Gm17366-201ENSMUST00000167629 187 ntBASIC8.56□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms