Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC6.52□□□□□ -1.36
Spg11Q3UHA3 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC6.52□□□□□ -1.36
Spg11Q3UHA3 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Spg11Q3UHA3 Gm19256-201ENSMUST00000218550 231 ntBASIC6.52□□□□□ -1.36
Spg11Q3UHA3 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
Spg11Q3UHA3 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
Spg11Q3UHA3 AC159205.2-201ENSMUST00000223759 816 ntBASIC6.52□□□□□ -1.36
Spg11Q3UHA3 Gm5582-201ENSMUST00000075251 522 ntBASIC6.52□□□□□ -1.36
Spg11Q3UHA3 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC6.52□□□□□ -1.36
Spg11Q3UHA3 Srp72-201ENSMUST00000101087 3625 ntAPPRIS P2 TSL 2 BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Kalrn-204ENSMUST00000114949 3618 ntTSL 5 BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Fam168a-201ENSMUST00000049053 6609 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Scn3b-202ENSMUST00000114956 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Osbpl6-203ENSMUST00000111930 3853 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Arhgap21-210ENSMUST00000154230 6972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Txnip-202ENSMUST00000074519 2827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Piwil4-203ENSMUST00000115644 3304 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Pvt1-203ENSMUST00000181657 2798 ntTSL 5 BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Gm12135-201ENSMUST00000119170 466 ntBASIC6.52□□□□□ -1.37
Spg11Q3UHA3 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Gm43141-201ENSMUST00000199695 274 ntBASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Gm45693-201ENSMUST00000211391 1157 ntBASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Olfr32-206ENSMUST00000215765 1241 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Olfr32-201ENSMUST00000099755 1016 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Kcnma1-206ENSMUST00000163322 3162 ntTSL 5 BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 AC154597.1-201ENSMUST00000224095 2713 ntBASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Spg11Q3UHA3 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Gm5381-201ENSMUST00000117975 1250 ntBASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Gm26784-201ENSMUST00000181666 410 ntBASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Gm44565-201ENSMUST00000208194 269 ntBASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Gm3266-201ENSMUST00000217832 591 ntBASIC6.51□□□□□ -1.37
Spg11Q3UHA3 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Il5ra-201ENSMUST00000167925 1704 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Csf3r-202ENSMUST00000106162 3481 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Abca8b-202ENSMUST00000106669 5052 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Tbc1d24-203ENSMUST00000097376 7265 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Gm2199-201ENSMUST00000119065 874 ntBASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Gm24733-201ENSMUST00000158863 253 ntBASIC6.51□□□□□ -1.37
Spg11Q3UHA3 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Gm44184-201ENSMUST00000204290 132 ntBASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Arpp21-229ENSMUST00000164754 3310 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Gm44883-201ENSMUST00000206063 3258 ntBASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Napg-201ENSMUST00000025474 3562 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Pgr15l-201ENSMUST00000033556 5379 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Oacyl-201ENSMUST00000115097 3431 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Spg11Q3UHA3 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 109.3 ms