Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
H3f3aP84244 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
H3f3aP84244 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
H3f3aP84244 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
H3f3aP84244 Gm44553-201ENSMUST00000206316 2037 ntBASIC6.24□□□□□ -1.41
H3f3aP84244 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
H3f3aP84244 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
H3f3aP84244 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
H3f3aP84244 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
H3f3aP84244 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC6.24□□□□□ -1.41
H3f3aP84244 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
H3f3aP84244 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
H3f3aP84244 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
H3f3aP84244 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
H3f3aP84244 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC6.24□□□□□ -1.41
H3f3aP84244 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
H3f3aP84244 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
H3f3aP84244 Gm9030-201ENSMUST00000218405 2410 ntBASIC6.24□□□□□ -1.41
H3f3aP84244 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
H3f3aP84244 Gm9029-201ENSMUST00000219232 2410 ntBASIC6.24□□□□□ -1.41
H3f3aP84244 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
H3f3aP84244 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
H3f3aP84244 Gm38009-201ENSMUST00000194884 3341 ntBASIC6.24□□□□□ -1.41
H3f3aP84244 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3f3aP84244 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3f3aP84244 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H3f3aP84244 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
H3f3aP84244 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3f3aP84244 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3f3aP84244 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
H3f3aP84244 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3f3aP84244 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3f3aP84244 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
H3f3aP84244 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC6.23□□□□□ -1.41
H3f3aP84244 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3f3aP84244 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3f3aP84244 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
H3f3aP84244 Gm26419-201ENSMUST00000104272 133 ntBASIC6.23□□□□□ -1.41
H3f3aP84244 Gm26416-201ENSMUST00000104280 134 ntBASIC6.23□□□□□ -1.41
H3f3aP84244 Gm25379-201ENSMUST00000104338 114 ntBASIC6.23□□□□□ -1.41
H3f3aP84244 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC6.23□□□□□ -1.41
H3f3aP84244 Gm14904-201ENSMUST00000117067 335 ntBASIC6.23□□□□□ -1.41
H3f3aP84244 Gm11903-201ENSMUST00000118958 727 ntBASIC6.23□□□□□ -1.41
H3f3aP84244 Gm11517-201ENSMUST00000119491 387 ntBASIC6.23□□□□□ -1.41
H3f3aP84244 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC6.23□□□□□ -1.41
H3f3aP84244 Gm11726-201ENSMUST00000121028 424 ntBASIC6.23□□□□□ -1.41
H3f3aP84244 Gm12477-201ENSMUST00000121221 571 ntBASIC6.23□□□□□ -1.41
H3f3aP84244 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H3f3aP84244 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H3f3aP84244 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3f3aP84244 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC6.23□□□□□ -1.41
H3f3aP84244 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC6.23□□□□□ -1.41
H3f3aP84244 Gm16357-201ENSMUST00000144091 474 ntBASIC6.23□□□□□ -1.41
H3f3aP84244 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC6.23□□□□□ -1.41
H3f3aP84244 Gm24442-201ENSMUST00000157238 327 ntBASIC6.23□□□□□ -1.41
H3f3aP84244 Gm26183-201ENSMUST00000157685 139 ntBASIC6.23□□□□□ -1.41
H3f3aP84244 Gm16113-201ENSMUST00000159629 372 ntBASIC6.23□□□□□ -1.41
H3f3aP84244 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC6.23□□□□□ -1.41
H3f3aP84244 Gm3326-201ENSMUST00000164656 1043 ntBASIC6.23□□□□□ -1.41
H3f3aP84244 Gm23945-201ENSMUST00000179609 92 ntBASIC6.23□□□□□ -1.41
H3f3aP84244 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3f3aP84244 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H3f3aP84244 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC6.23□□□□□ -1.41
H3f3aP84244 Gm43595-201ENSMUST00000196464 1071 ntBASIC6.23□□□□□ -1.41
H3f3aP84244 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
H3f3aP84244 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC6.23□□□□□ -1.41
H3f3aP84244 AC127242.3-201ENSMUST00000222009 580 ntBASIC6.23□□□□□ -1.41
H3f3aP84244 AC165157.1-201ENSMUST00000222981 580 ntBASIC6.23□□□□□ -1.41
H3f3aP84244 CT009711.2-202ENSMUST00000224538 973 ntBASIC6.23□□□□□ -1.41
H3f3aP84244 AC154361.1-201ENSMUST00000225694 745 ntBASIC6.23□□□□□ -1.41
H3f3aP84244 AC125405.2-201ENSMUST00000227862 383 ntBASIC6.23□□□□□ -1.41
H3f3aP84244 AC138765.3-201ENSMUST00000227981 423 ntBASIC6.23□□□□□ -1.41
H3f3aP84244 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
H3f3aP84244 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
H3f3aP84244 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
H3f3aP84244 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3f3aP84244 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
H3f3aP84244 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3f3aP84244 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
H3f3aP84244 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC6.23□□□□□ -1.41
H3f3aP84244 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
H3f3aP84244 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
H3f3aP84244 Gm10693-201ENSMUST00000144146 2037 ntBASIC6.23□□□□□ -1.41
H3f3aP84244 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
H3f3aP84244 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3f3aP84244 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
H3f3aP84244 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3f3aP84244 Gm10307-201ENSMUST00000189839 1337 ntBASIC6.23□□□□□ -1.41
H3f3aP84244 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
H3f3aP84244 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3f3aP84244 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
H3f3aP84244 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
H3f3aP84244 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H3f3aP84244 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
H3f3aP84244 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H3f3aP84244 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H3f3aP84244 Gm43339-201ENSMUST00000200032 1606 ntBASIC6.22□□□□□ -1.41
H3f3aP84244 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H3f3aP84244 Gm22774-201ENSMUST00000102084 109 ntBASIC6.22□□□□□ -1.41
H3f3aP84244 Gm25311-201ENSMUST00000104136 132 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms