Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm45537-201ENSMUST00000211539 2708 ntBASIC9.41□□□□□ -0.9
Nphp4P59240 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nphp4P59240 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC9.41□□□□□ -0.9
Nphp4P59240 Gm43496-201ENSMUST00000201682 3001 ntBASIC9.41□□□□□ -0.9
Nphp4P59240 Tardbp-202ENSMUST00000084125 7477 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nphp4P59240 Gm22267-201ENSMUST00000104008 131 ntBASIC9.4□□□□□ -0.9
Nphp4P59240 Gm22284-201ENSMUST00000104132 132 ntBASIC9.4□□□□□ -0.9
Nphp4P59240 Gm23748-201ENSMUST00000104227 131 ntBASIC9.4□□□□□ -0.9
Nphp4P59240 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nphp4P59240 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC9.4□□□□□ -0.9
Nphp4P59240 Gm14000-201ENSMUST00000118670 233 ntBASIC9.4□□□□□ -0.9
Nphp4P59240 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC9.4□□□□□ -0.9
Nphp4P59240 Mir1953-201ENSMUST00000157866 89 ntBASIC9.4□□□□□ -0.9
Nphp4P59240 Gm20454-201ENSMUST00000172713 221 ntBASIC9.4□□□□□ -0.9
Nphp4P59240 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nphp4P59240 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Nphp4P59240 Gm45122-201ENSMUST00000206376 784 ntBASIC9.4□□□□□ -0.9
Nphp4P59240 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC9.4□□□□□ -0.9
Nphp4P59240 Gm45394-201ENSMUST00000209240 1175 ntBASIC9.4□□□□□ -0.9
Nphp4P59240 Gm17849-201ENSMUST00000219788 853 ntBASIC9.4□□□□□ -0.9
Nphp4P59240 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC9.4□□□□□ -0.9
Nphp4P59240 Gm35619-201ENSMUST00000222548 600 ntBASIC9.4□□□□□ -0.9
Nphp4P59240 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC9.4□□□□□ -0.9
Nphp4P59240 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Nphp4P59240 Mir196a-1-201ENSMUST00000083612 102 ntBASIC9.4□□□□□ -0.9
Nphp4P59240 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nphp4P59240 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Nphp4P59240 Mgat4a-201ENSMUST00000042161 7030 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nphp4P59240 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC9.4□□□□□ -0.9
Nphp4P59240 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Nphp4P59240 Muc5ac-201ENSMUST00000041924 8256 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
Nphp4P59240 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Nphp4P59240 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.9
Nphp4P59240 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Nphp4P59240 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nphp4P59240 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Nphp4P59240 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Nphp4P59240 Trpm3-201ENSMUST00000037901 5082 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Nphp4P59240 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC9.4□□□□□ -0.91
Nphp4P59240 Vmn1r199-202ENSMUST00000227685 5713 ntAPPRIS P2 BASIC9.4□□□□□ -0.91
Nphp4P59240 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Nphp4P59240 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Nphp4P59240 Gm14733-201ENSMUST00000117680 133 ntBASIC9.39□□□□□ -0.91
Nphp4P59240 Gm13669-201ENSMUST00000122366 457 ntBASIC9.39□□□□□ -0.91
Nphp4P59240 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nphp4P59240 Gm24781-201ENSMUST00000157636 117 ntBASIC9.39□□□□□ -0.91
Nphp4P59240 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC9.39□□□□□ -0.91
Nphp4P59240 Mir6348-201ENSMUST00000183804 120 ntBASIC9.39□□□□□ -0.91
Nphp4P59240 Gm28023-201ENSMUST00000184556 60 ntBASIC9.39□□□□□ -0.91
Nphp4P59240 Gm27825-201ENSMUST00000184586 60 ntBASIC9.39□□□□□ -0.91
Nphp4P59240 Mir6989-201ENSMUST00000184812 65 ntBASIC9.39□□□□□ -0.91
Nphp4P59240 Gm29464-201ENSMUST00000187692 513 ntBASIC9.39□□□□□ -0.91
Nphp4P59240 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC9.39□□□□□ -0.91
Nphp4P59240 Gm37191-201ENSMUST00000193346 388 ntBASIC9.39□□□□□ -0.91
Nphp4P59240 Gm7463-201ENSMUST00000201541 547 ntBASIC9.39□□□□□ -0.91
Nphp4P59240 Gm19324-201ENSMUST00000213229 1169 ntBASIC9.39□□□□□ -0.91
Nphp4P59240 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nphp4P59240 AC154573.2-201ENSMUST00000224174 378 ntBASIC9.39□□□□□ -0.91
Nphp4P59240 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nphp4P59240 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
Nphp4P59240 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Nphp4P59240 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nphp4P59240 AC163660.4-201ENSMUST00000224983 2171 ntBASIC9.39□□□□□ -0.91
Nphp4P59240 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nphp4P59240 Gm43873-201ENSMUST00000204505 3938 ntBASIC9.39□□□□□ -0.91
Nphp4P59240 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Nphp4P59240 Olfr77-201ENSMUST00000057596 9649 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nphp4P59240 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nphp4P59240 Olfr943-202ENSMUST00000213176 8275 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Nphp4P59240 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nphp4P59240 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC9.39□□□□□ -0.91
Nphp4P59240 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nphp4P59240 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nphp4P59240 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nphp4P59240 Fbxo7-204ENSMUST00000130320 5388 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nphp4P59240 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nphp4P59240 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nphp4P59240 CT571245.1-201ENSMUST00000218642 3465 ntBASIC9.39□□□□□ -0.91
Nphp4P59240 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC9.39□□□□□ -0.91
Nphp4P59240 Gm10773-201ENSMUST00000218071 3935 ntBASIC9.39□□□□□ -0.91
Nphp4P59240 Rel-201ENSMUST00000102864 7466 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nphp4P59240 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nphp4P59240 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nphp4P59240 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nphp4P59240 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nphp4P59240 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nphp4P59240 Gm13176-201ENSMUST00000117910 477 ntBASIC9.39□□□□□ -0.91
Nphp4P59240 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Nphp4P59240 Gm3810-201ENSMUST00000122413 476 ntBASIC9.39□□□□□ -0.91
Nphp4P59240 Gm23891-201ENSMUST00000158114 138 ntBASIC9.39□□□□□ -0.91
Nphp4P59240 Gm26357-201ENSMUST00000158218 115 ntBASIC9.39□□□□□ -0.91
Nphp4P59240 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC9.39□□□□□ -0.91
Nphp4P59240 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nphp4P59240 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC9.39□□□□□ -0.91
Nphp4P59240 Gm29663-201ENSMUST00000186962 853 ntBASIC9.39□□□□□ -0.91
Nphp4P59240 Gm28620-201ENSMUST00000190463 439 ntBASIC9.39□□□□□ -0.91
Nphp4P59240 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC9.39□□□□□ -0.91
Nphp4P59240 Gm43576-201ENSMUST00000197937 871 ntBASIC9.39□□□□□ -0.91
Nphp4P59240 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC9.39□□□□□ -0.91
Nphp4P59240 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms