Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Tpm1P58771 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Tpm1P58771 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Tpm1P58771 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Tpm1P58771 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC7.67□□□□□ -1.18
Tpm1P58771 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Tpm1P58771 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Tpm1P58771 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Tpm1P58771 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Tpm1P58771 Gm33167-201ENSMUST00000201933 2643 ntBASIC7.66□□□□□ -1.18
Tpm1P58771 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Tpm1P58771 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Tpm1P58771 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Tpm1P58771 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Tpm1P58771 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Tpm1P58771 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Tpm1P58771 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Tpm1P58771 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Tpm1P58771 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Tpm1P58771 Gm12642-201ENSMUST00000121098 876 ntBASIC7.66□□□□□ -1.18
Tpm1P58771 Gm14053-201ENSMUST00000121662 470 ntBASIC7.66□□□□□ -1.18
Tpm1P58771 BC002163-201ENSMUST00000121906 319 ntBASIC7.66□□□□□ -1.18
Tpm1P58771 Gm2735-201ENSMUST00000136133 277 ntBASIC7.66□□□□□ -1.18
Tpm1P58771 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
Tpm1P58771 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC7.66□□□□□ -1.18
Tpm1P58771 Gm23031-201ENSMUST00000157998 119 ntBASIC7.66□□□□□ -1.18
Tpm1P58771 Gm6061-201ENSMUST00000175860 492 ntBASIC7.66□□□□□ -1.18
Tpm1P58771 Gm4956-202ENSMUST00000178869 672 ntBASIC7.66□□□□□ -1.18
Tpm1P58771 Gm27458-201ENSMUST00000185108 121 ntBASIC7.66□□□□□ -1.18
Tpm1P58771 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Tpm1P58771 Gm6236-201ENSMUST00000193785 1009 ntBASIC7.66□□□□□ -1.18
Tpm1P58771 Gm6077-201ENSMUST00000196008 499 ntBASIC7.66□□□□□ -1.18
Tpm1P58771 Gm43539-201ENSMUST00000196190 363 ntTSL 3 BASIC7.66□□□□□ -1.18
Tpm1P58771 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC7.66□□□□□ -1.18
Tpm1P58771 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Tpm1P58771 AC153864.1-201ENSMUST00000218482 523 ntBASIC7.66□□□□□ -1.18
Tpm1P58771 Gm19238-201ENSMUST00000221936 1260 ntBASIC7.66□□□□□ -1.18
Tpm1P58771 AC154461.4-201ENSMUST00000224878 468 ntBASIC7.66□□□□□ -1.18
Tpm1P58771 Apoa2-201ENSMUST00000005824 492 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Tpm1P58771 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Tpm1P58771 Snora21-201ENSMUST00000082967 137 ntBASIC7.66□□□□□ -1.18
Tpm1P58771 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Tpm1P58771 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Tpm1P58771 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Tpm1P58771 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Tpm1P58771 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Tpm1P58771 Gm45174-201ENSMUST00000208884 3065 ntBASIC7.66□□□□□ -1.18
Tpm1P58771 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Tpm1P58771 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Tpm1P58771 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Tpm1P58771 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Tpm1P58771 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Tpm1P58771 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Tpm1P58771 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Tpm1P58771 Gm37685-201ENSMUST00000193507 2177 ntBASIC7.66□□□□□ -1.18
Tpm1P58771 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Tpm1P58771 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Tpm1P58771 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Tpm1P58771 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC7.65□□□□□ -1.18
Tpm1P58771 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Tpm1P58771 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC7.65□□□□□ -1.18
Tpm1P58771 AC153971.1-201ENSMUST00000215097 3811 ntBASIC7.65□□□□□ -1.18
Tpm1P58771 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC7.65□□□□□ -1.18
Tpm1P58771 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Tpm1P58771 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Tpm1P58771 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Tpm1P58771 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Tpm1P58771 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC7.65□□□□□ -1.18
Tpm1P58771 Gm13106-201ENSMUST00000119045 1443 ntBASIC7.65□□□□□ -1.18
Tpm1P58771 Gm11257-201ENSMUST00000121313 315 ntBASIC7.65□□□□□ -1.18
Tpm1P58771 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Tpm1P58771 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Tpm1P58771 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC7.65□□□□□ -1.18
Tpm1P58771 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC7.65□□□□□ -1.18
Tpm1P58771 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Tpm1P58771 Gm22569-201ENSMUST00000175545 124 ntBASIC7.65□□□□□ -1.18
Tpm1P58771 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Tpm1P58771 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC7.65□□□□□ -1.18
Tpm1P58771 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC7.65□□□□□ -1.18
Tpm1P58771 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC7.65□□□□□ -1.18
Tpm1P58771 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC7.65□□□□□ -1.18
Tpm1P58771 Gm28665-201ENSMUST00000189269 670 ntBASIC7.65□□□□□ -1.18
Tpm1P58771 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC7.65□□□□□ -1.18
Tpm1P58771 Gm37977-201ENSMUST00000193096 721 ntBASIC7.65□□□□□ -1.18
Tpm1P58771 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC7.65□□□□□ -1.18
Tpm1P58771 Gm18131-201ENSMUST00000199241 449 ntBASIC7.65□□□□□ -1.18
Tpm1P58771 Gm42668-201ENSMUST00000200747 2487 ntBASIC7.65□□□□□ -1.18
Tpm1P58771 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
Tpm1P58771 Gm44111-201ENSMUST00000204649 399 ntBASIC7.65□□□□□ -1.18
Tpm1P58771 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC7.65□□□□□ -1.18
Tpm1P58771 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC7.65□□□□□ -1.18
Tpm1P58771 AC139941.1-201ENSMUST00000221517 478 ntBASIC7.65□□□□□ -1.18
Tpm1P58771 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC7.65□□□□□ -1.18
Tpm1P58771 AC140208.1-201ENSMUST00000226609 285 ntBASIC7.65□□□□□ -1.18
Tpm1P58771 AC135119.1-204ENSMUST00000228036 2663 ntBASIC7.65□□□□□ -1.18
Tpm1P58771 AC154806.5-204ENSMUST00000228900 867 ntBASIC7.65□□□□□ -1.18
Tpm1P58771 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Tpm1P58771 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Tpm1P58771 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Tpm1P58771 Gm37531-201ENSMUST00000191628 5415 ntBASIC7.65□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms