Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 AC130831.1-201ENSMUST00000224546 1474 ntBASIC6.79□□□□□ -1.32
Sox3P53784 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC6.79□□□□□ -1.32
Sox3P53784 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sox3P53784 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Sox3P53784 Gm29670-201ENSMUST00000190228 2491 ntBASIC6.78□□□□□ -1.32
Sox3P53784 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Sox3P53784 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sox3P53784 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC6.78□□□□□ -1.32
Sox3P53784 Gm5903-201ENSMUST00000121836 2325 ntBASIC6.78□□□□□ -1.32
Sox3P53784 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Sox3P53784 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox3P53784 Gm37206-201ENSMUST00000195512 3069 ntBASIC6.78□□□□□ -1.32
Sox3P53784 Gm43422-201ENSMUST00000199780 3571 ntBASIC6.78□□□□□ -1.32
Sox3P53784 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox3P53784 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox3P53784 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
Sox3P53784 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox3P53784 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sox3P53784 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox3P53784 Gm13732-201ENSMUST00000117753 535 ntBASIC6.78□□□□□ -1.32
Sox3P53784 Gm12244-201ENSMUST00000119500 291 ntBASIC6.78□□□□□ -1.32
Sox3P53784 Gm12321-201ENSMUST00000121485 804 ntBASIC6.78□□□□□ -1.32
Sox3P53784 Gm14695-201ENSMUST00000121721 282 ntBASIC6.78□□□□□ -1.32
Sox3P53784 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC6.78□□□□□ -1.32
Sox3P53784 Gm14380-201ENSMUST00000122298 431 ntBASIC6.78□□□□□ -1.32
Sox3P53784 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Sox3P53784 Gm27014-201ENSMUST00000182658 937 ntBASIC6.78□□□□□ -1.32
Sox3P53784 Gm27360-201ENSMUST00000183487 80 ntBASIC6.78□□□□□ -1.32
Sox3P53784 Mir7020-201ENSMUST00000183787 70 ntBASIC6.78□□□□□ -1.32
Sox3P53784 Gm37620-201ENSMUST00000192910 501 ntBASIC6.78□□□□□ -1.32
Sox3P53784 Gm37017-201ENSMUST00000195266 747 ntBASIC6.78□□□□□ -1.32
Sox3P53784 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC6.78□□□□□ -1.32
Sox3P53784 Gm18907-201ENSMUST00000209719 932 ntBASIC6.78□□□□□ -1.32
Sox3P53784 AC155270.1-202ENSMUST00000221503 352 ntBASIC6.78□□□□□ -1.32
Sox3P53784 Gm18620-201ENSMUST00000222295 324 ntBASIC6.78□□□□□ -1.32
Sox3P53784 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC6.78□□□□□ -1.32
Sox3P53784 Cma2-202ENSMUST00000228263 857 ntBASIC6.78□□□□□ -1.32
Sox3P53784 Gm2531-201ENSMUST00000075609 512 ntBASIC6.78□□□□□ -1.32
Sox3P53784 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox3P53784 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sox3P53784 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sox3P53784 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sox3P53784 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sox3P53784 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox3P53784 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.78□□□□□ -1.32
Sox3P53784 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox3P53784 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Sox3P53784 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC6.77□□□□□ -1.32
Sox3P53784 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Sox3P53784 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Sox3P53784 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Sox3P53784 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Sox3P53784 AC122356.1-202ENSMUST00000227328 2758 ntBASIC6.77□□□□□ -1.33
Sox3P53784 Gm18632-201ENSMUST00000222597 2087 ntBASIC6.77□□□□□ -1.33
Sox3P53784 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Sox3P53784 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC6.77□□□□□ -1.33
Sox3P53784 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Sox3P53784 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Sox3P53784 Gm7613-201ENSMUST00000139070 487 ntBASIC6.77□□□□□ -1.33
Sox3P53784 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC6.77□□□□□ -1.33
Sox3P53784 Gm7289-201ENSMUST00000168993 734 ntBASIC6.77□□□□□ -1.33
Sox3P53784 Gm9286-201ENSMUST00000173586 508 ntBASIC6.77□□□□□ -1.33
Sox3P53784 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Sox3P53784 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC6.77□□□□□ -1.33
Sox3P53784 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Sox3P53784 Gm7891-201ENSMUST00000190284 843 ntBASIC6.77□□□□□ -1.33
Sox3P53784 Ighv8-3-201ENSMUST00000194985 295 ntBASIC6.77□□□□□ -1.33
Sox3P53784 Gm43748-201ENSMUST00000202329 1233 ntBASIC6.77□□□□□ -1.33
Sox3P53784 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC6.77□□□□□ -1.33
Sox3P53784 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC6.77□□□□□ -1.33
Sox3P53784 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC6.77□□□□□ -1.33
Sox3P53784 AC155709.1-201ENSMUST00000218794 162 ntBASIC6.77□□□□□ -1.33
Sox3P53784 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC6.77□□□□□ -1.33
Sox3P53784 AC167013.4-201ENSMUST00000226712 317 ntBASIC6.77□□□□□ -1.33
Sox3P53784 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Sox3P53784 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Sox3P53784 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sox3P53784 Gm5454-201ENSMUST00000052030 1453 ntBASIC6.77□□□□□ -1.33
Sox3P53784 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Sox3P53784 CT025566.1-202ENSMUST00000224800 2511 ntBASIC6.77□□□□□ -1.33
Sox3P53784 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sox3P53784 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Sox3P53784 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Sox3P53784 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC6.76□□□□□ -1.33
Sox3P53784 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Sox3P53784 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox3P53784 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox3P53784 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
Sox3P53784 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox3P53784 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC6.76□□□□□ -1.33
Sox3P53784 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sox3P53784 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox3P53784 Gm14116-201ENSMUST00000117733 805 ntBASIC6.76□□□□□ -1.33
Sox3P53784 Gm13798-201ENSMUST00000118285 139 ntBASIC6.76□□□□□ -1.33
Sox3P53784 Gm15484-201ENSMUST00000118871 828 ntBASIC6.76□□□□□ -1.33
Sox3P53784 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox3P53784 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC6.76□□□□□ -1.33
Sox3P53784 Mir1983-201ENSMUST00000157523 132 ntBASIC6.76□□□□□ -1.33
Sox3P53784 Gm23903-201ENSMUST00000157566 131 ntBASIC6.76□□□□□ -1.33
Sox3P53784 Mir1930-201ENSMUST00000158799 84 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 114.9 ms