Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col2a1P28481 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC7.9□□□□□ -1.15
Col2a1P28481 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.15
Col2a1P28481 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Col2a1P28481 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col2a1P28481 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col2a1P28481 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col2a1P28481 Dlg2-201ENSMUST00000074273 5278 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Col2a1P28481 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col2a1P28481 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Col2a1P28481 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Col2a1P28481 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col2a1P28481 Gm14745-201ENSMUST00000118480 1096 ntBASIC7.89□□□□□ -1.15
Col2a1P28481 Gm27152-201ENSMUST00000183828 99 ntBASIC7.89□□□□□ -1.15
Col2a1P28481 Gm21877-201ENSMUST00000185640 694 ntBASIC7.89□□□□□ -1.15
Col2a1P28481 Gm3841-201ENSMUST00000191399 451 ntBASIC7.89□□□□□ -1.15
Col2a1P28481 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC7.89□□□□□ -1.15
Col2a1P28481 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC7.89□□□□□ -1.15
Col2a1P28481 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC7.89□□□□□ -1.15
Col2a1P28481 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC7.89□□□□□ -1.15
Col2a1P28481 Gm32983-201ENSMUST00000208500 505 ntBASIC7.89□□□□□ -1.15
Col2a1P28481 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
Col2a1P28481 AC164295.1-201ENSMUST00000224861 186 ntBASIC7.89□□□□□ -1.15
Col2a1P28481 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col2a1P28481 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col2a1P28481 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col2a1P28481 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col2a1P28481 Gm44704-201ENSMUST00000208963 1990 ntBASIC7.89□□□□□ -1.15
Col2a1P28481 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col2a1P28481 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col2a1P28481 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC7.89□□□□□ -1.15
Col2a1P28481 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC7.89□□□□□ -1.15
Col2a1P28481 Gm42577-201ENSMUST00000201367 3211 ntBASIC7.89□□□□□ -1.15
Col2a1P28481 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC7.89□□□□□ -1.15
Col2a1P28481 Gm43637-201ENSMUST00000202206 2926 ntBASIC7.89□□□□□ -1.15
Col2a1P28481 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col2a1P28481 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col2a1P28481 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC7.89□□□□□ -1.15
Col2a1P28481 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col2a1P28481 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col2a1P28481 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col2a1P28481 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC7.88□□□□□ -1.15
Col2a1P28481 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Col2a1P28481 Gm15712-201ENSMUST00000120369 1156 ntBASIC7.88□□□□□ -1.15
Col2a1P28481 Gm11370-201ENSMUST00000120583 260 ntBASIC7.88□□□□□ -1.15
Col2a1P28481 Gm22552-201ENSMUST00000157796 337 ntBASIC7.88□□□□□ -1.15
Col2a1P28481 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC7.88□□□□□ -1.15
Col2a1P28481 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC7.88□□□□□ -1.15
Col2a1P28481 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col2a1P28481 Gm28023-201ENSMUST00000184556 60 ntBASIC7.88□□□□□ -1.15
Col2a1P28481 Gm27825-201ENSMUST00000184586 60 ntBASIC7.88□□□□□ -1.15
Col2a1P28481 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC7.88□□□□□ -1.15
Col2a1P28481 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC7.88□□□□□ -1.15
Col2a1P28481 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC7.88□□□□□ -1.15
Col2a1P28481 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC7.88□□□□□ -1.15
Col2a1P28481 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC7.88□□□□□ -1.15
Col2a1P28481 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col2a1P28481 Gm35619-201ENSMUST00000222548 600 ntBASIC7.88□□□□□ -1.15
Col2a1P28481 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col2a1P28481 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col2a1P28481 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col2a1P28481 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Col2a1P28481 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
Col2a1P28481 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Col2a1P28481 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col2a1P28481 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC7.88□□□□□ -1.15
Col2a1P28481 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Col2a1P28481 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
Col2a1P28481 Gm37518-201ENSMUST00000194930 2603 ntBASIC7.88□□□□□ -1.15
Col2a1P28481 Gm42692-201ENSMUST00000199482 2833 ntBASIC7.88□□□□□ -1.15
Col2a1P28481 Gm43612-201ENSMUST00000196087 3207 ntBASIC7.88□□□□□ -1.15
Col2a1P28481 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC7.88□□□□□ -1.15
Col2a1P28481 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col2a1P28481 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col2a1P28481 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col2a1P28481 AC163660.4-201ENSMUST00000224983 2171 ntBASIC7.88□□□□□ -1.15
Col2a1P28481 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col2a1P28481 Gm3555-201ENSMUST00000160287 1395 ntBASIC7.88□□□□□ -1.15
Col2a1P28481 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col2a1P28481 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Col2a1P28481 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col2a1P28481 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC7.88□□□□□ -1.15
Col2a1P28481 Helz2-202ENSMUST00000108831 10109 ntAPPRIS P2 TSL 5 BASIC7.88□□□□□ -1.15
Col2a1P28481 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col2a1P28481 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col2a1P28481 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC7.88□□□□□ -1.15
Col2a1P28481 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col2a1P28481 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Col2a1P28481 AC130831.1-201ENSMUST00000224546 1474 ntBASIC7.88□□□□□ -1.15
Col2a1P28481 Gm22267-201ENSMUST00000104008 131 ntBASIC7.87□□□□□ -1.15
Col2a1P28481 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Col2a1P28481 Mir6348-201ENSMUST00000183804 120 ntBASIC7.87□□□□□ -1.15
Col2a1P28481 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col2a1P28481 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC7.87□□□□□ -1.15
Col2a1P28481 Gm45122-201ENSMUST00000206376 784 ntBASIC7.87□□□□□ -1.15
Col2a1P28481 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC7.87□□□□□ -1.15
Col2a1P28481 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC7.87□□□□□ -1.15
Col2a1P28481 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Col2a1P28481 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC7.87□□□□□ -1.15
Col2a1P28481 Gm7731-201ENSMUST00000091759 470 ntBASIC7.87□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 107.7 ms