Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 AC134333.1-201ENSMUST00000204536 944 ntBASIC6.72□□□□□ -1.33
Clk1P22518 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC6.72□□□□□ -1.33
Clk1P22518 AC171206.1-201ENSMUST00000213612 213 ntBASIC6.72□□□□□ -1.33
Clk1P22518 AC151904.2-201ENSMUST00000218683 1177 ntBASIC6.72□□□□□ -1.33
Clk1P22518 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC6.72□□□□□ -1.33
Clk1P22518 AC157650.2-201ENSMUST00000224666 328 ntBASIC6.72□□□□□ -1.33
Clk1P22518 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Clk1P22518 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clk1P22518 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clk1P22518 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clk1P22518 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Clk1P22518 Olfr890-201ENSMUST00000079804 945 ntBASIC6.72□□□□□ -1.33
Clk1P22518 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Clk1P22518 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clk1P22518 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
Clk1P22518 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Clk1P22518 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Clk1P22518 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Clk1P22518 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clk1P22518 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC6.72□□□□□ -1.33
Clk1P22518 AC122426.2-201ENSMUST00000216522 2947 ntBASIC6.72□□□□□ -1.33
Clk1P22518 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Clk1P22518 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Clk1P22518 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Clk1P22518 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Clk1P22518 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Clk1P22518 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Clk1P22518 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Clk1P22518 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Clk1P22518 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Clk1P22518 Gm43422-201ENSMUST00000199780 3571 ntBASIC6.71□□□□□ -1.33
Clk1P22518 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC6.71□□□□□ -1.34
Clk1P22518 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Clk1P22518 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Clk1P22518 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Clk1P22518 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Clk1P22518 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Clk1P22518 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Clk1P22518 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.34
Clk1P22518 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Clk1P22518 Gm13521-201ENSMUST00000118922 866 ntBASIC6.71□□□□□ -1.34
Clk1P22518 Gm11245-201ENSMUST00000119419 1037 ntBASIC6.71□□□□□ -1.34
Clk1P22518 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.71□□□□□ -1.34
Clk1P22518 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Clk1P22518 Gm12152-201ENSMUST00000122465 684 ntBASIC6.71□□□□□ -1.34
Clk1P22518 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Clk1P22518 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC6.71□□□□□ -1.34
Clk1P22518 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC6.71□□□□□ -1.34
Clk1P22518 Gm24011-201ENSMUST00000157732 268 ntBASIC6.71□□□□□ -1.34
Clk1P22518 Gm24883-201ENSMUST00000158391 281 ntBASIC6.71□□□□□ -1.34
Clk1P22518 Gm19840-201ENSMUST00000169624 882 ntBASIC6.71□□□□□ -1.34
Clk1P22518 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Clk1P22518 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Clk1P22518 Gm6610-201ENSMUST00000186324 358 ntBASIC6.71□□□□□ -1.34
Clk1P22518 Gm22149-202ENSMUST00000196259 137 ntBASIC6.71□□□□□ -1.34
Clk1P22518 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC6.71□□□□□ -1.34
Clk1P22518 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC6.71□□□□□ -1.34
Clk1P22518 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Clk1P22518 AC120002.1-201ENSMUST00000218456 331 ntBASIC6.71□□□□□ -1.34
Clk1P22518 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.71□□□□□ -1.34
Clk1P22518 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.71□□□□□ -1.34
Clk1P22518 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
Clk1P22518 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Clk1P22518 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Clk1P22518 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Clk1P22518 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Clk1P22518 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Clk1P22518 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Clk1P22518 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Clk1P22518 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Clk1P22518 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Clk1P22518 Gm26645-201ENSMUST00000181076 1316 ntBASIC6.71□□□□□ -1.34
Clk1P22518 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Clk1P22518 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Clk1P22518 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
Clk1P22518 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Clk1P22518 Gm5512-202ENSMUST00000220222 1522 ntBASIC6.71□□□□□ -1.34
Clk1P22518 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Clk1P22518 Gm42898-201ENSMUST00000200370 3073 ntBASIC6.7□□□□□ -1.34
Clk1P22518 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Clk1P22518 Gm44255-201ENSMUST00000203456 2053 ntBASIC6.7□□□□□ -1.34
Clk1P22518 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Clk1P22518 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Clk1P22518 Gm6640-201ENSMUST00000120629 1587 ntBASIC6.7□□□□□ -1.34
Clk1P22518 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Clk1P22518 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Clk1P22518 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Clk1P22518 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Clk1P22518 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC6.7□□□□□ -1.34
Clk1P22518 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Clk1P22518 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Clk1P22518 Gm23485-201ENSMUST00000104181 155 ntBASIC6.7□□□□□ -1.34
Clk1P22518 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
Clk1P22518 Gm11810-201ENSMUST00000118311 333 ntBASIC6.7□□□□□ -1.34
Clk1P22518 Gm12985-201ENSMUST00000118376 183 ntBASIC6.7□□□□□ -1.34
Clk1P22518 Gm13163-201ENSMUST00000119875 336 ntBASIC6.7□□□□□ -1.34
Clk1P22518 Gm15842-201ENSMUST00000120513 618 ntBASIC6.7□□□□□ -1.34
Clk1P22518 Gm11383-201ENSMUST00000121346 807 ntBASIC6.7□□□□□ -1.34
Clk1P22518 Gm11954-201ENSMUST00000121403 349 ntBASIC6.7□□□□□ -1.34
Clk1P22518 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms