Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC8.39□□□□□ -1.07
Col4a1P02463 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Col4a1P02463 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Col4a1P02463 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col4a1P02463 Gm44677-201ENSMUST00000209151 3739 ntBASIC8.39□□□□□ -1.07
Col4a1P02463 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC8.39□□□□□ -1.07
Col4a1P02463 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Col4a1P02463 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC8.39□□□□□ -1.07
Col4a1P02463 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Col4a1P02463 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Col4a1P02463 Gm5319-201ENSMUST00000118965 873 ntBASIC8.39□□□□□ -1.07
Col4a1P02463 Gm15502-201ENSMUST00000121449 208 ntBASIC8.39□□□□□ -1.07
Col4a1P02463 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC8.39□□□□□ -1.07
Col4a1P02463 Gm25675-201ENSMUST00000174979 118 ntBASIC8.39□□□□□ -1.07
Col4a1P02463 Mir5107-201ENSMUST00000175586 88 ntBASIC8.39□□□□□ -1.07
Col4a1P02463 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Col4a1P02463 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC8.39□□□□□ -1.07
Col4a1P02463 AC073562.1-201ENSMUST00000222117 401 ntBASIC8.39□□□□□ -1.07
Col4a1P02463 Gm15732-201ENSMUST00000079794 480 ntBASIC8.39□□□□□ -1.07
Col4a1P02463 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC8.39□□□□□ -1.07
Col4a1P02463 Arid1b-203ENSMUST00000115799 9888 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Col4a1P02463 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Col4a1P02463 D630045J12Rik-206ENSMUST00000169256 10968 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
Col4a1P02463 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Col4a1P02463 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col4a1P02463 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Col4a1P02463 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC8.38□□□□□ -1.07
Col4a1P02463 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Col4a1P02463 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Col4a1P02463 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Col4a1P02463 Adgrb3-207ENSMUST00000151309 5448 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col4a1P02463 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Col4a1P02463 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col4a1P02463 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col4a1P02463 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
Col4a1P02463 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col4a1P02463 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Col4a1P02463 Olfr1276-203ENSMUST00000218065 5052 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Col4a1P02463 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Col4a1P02463 Gm23311-201ENSMUST00000104152 134 ntBASIC8.38□□□□□ -1.07
Col4a1P02463 Gm14925-201ENSMUST00000120611 438 ntBASIC8.38□□□□□ -1.07
Col4a1P02463 Gm7212-201ENSMUST00000120817 348 ntBASIC8.38□□□□□ -1.07
Col4a1P02463 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC8.38□□□□□ -1.07
Col4a1P02463 Gm23896-201ENSMUST00000158109 130 ntBASIC8.38□□□□□ -1.07
Col4a1P02463 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC8.38□□□□□ -1.07
Col4a1P02463 Gm22701-201ENSMUST00000175371 291 ntBASIC8.38□□□□□ -1.07
Col4a1P02463 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Col4a1P02463 Gm17048-201ENSMUST00000179266 847 ntBASIC8.38□□□□□ -1.07
Col4a1P02463 Gm21392-201ENSMUST00000182950 972 ntBASIC8.38□□□□□ -1.07
Col4a1P02463 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC8.38□□□□□ -1.07
Col4a1P02463 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC8.38□□□□□ -1.07
Col4a1P02463 Gm9240-201ENSMUST00000206527 742 ntBASIC8.38□□□□□ -1.07
Col4a1P02463 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
Col4a1P02463 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC8.38□□□□□ -1.07
Col4a1P02463 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Col4a1P02463 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC8.38□□□□□ -1.07
Col4a1P02463 AC151904.3-201ENSMUST00000219266 895 ntBASIC8.38□□□□□ -1.07
Col4a1P02463 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Col4a1P02463 Efcab6-207ENSMUST00000156187 5012 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col4a1P02463 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col4a1P02463 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col4a1P02463 Hcfc1-202ENSMUST00000114372 8262 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Col4a1P02463 Gm39041-201ENSMUST00000205557 3902 ntBASIC8.38□□□□□ -1.07
Col4a1P02463 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col4a1P02463 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Col4a1P02463 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col4a1P02463 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC8.38□□□□□ -1.07
Col4a1P02463 Gm37924-201ENSMUST00000195470 3647 ntBASIC8.37□□□□□ -1.07
Col4a1P02463 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col4a1P02463 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Col4a1P02463 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC8.37□□□□□ -1.07
Col4a1P02463 Gm8822-201ENSMUST00000118948 2347 ntBASIC8.37□□□□□ -1.07
Col4a1P02463 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Col4a1P02463 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col4a1P02463 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC8.37□□□□□ -1.07
Col4a1P02463 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col4a1P02463 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Col4a1P02463 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Col4a1P02463 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC8.37□□□□□ -1.07
Col4a1P02463 Mir6367-201ENSMUST00000183385 102 ntBASIC8.37□□□□□ -1.07
Col4a1P02463 Gm28885-201ENSMUST00000185615 563 ntBASIC8.37□□□□□ -1.07
Col4a1P02463 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col4a1P02463 Gm28620-201ENSMUST00000190463 439 ntBASIC8.37□□□□□ -1.07
Col4a1P02463 BC049739-201ENSMUST00000202626 660 ntBASIC8.37□□□□□ -1.07
Col4a1P02463 Gm5154-201ENSMUST00000203971 399 ntBASIC8.37□□□□□ -1.07
Col4a1P02463 Gm44705-201ENSMUST00000206719 339 ntBASIC8.37□□□□□ -1.07
Col4a1P02463 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC8.37□□□□□ -1.07
Col4a1P02463 AC165292.1-201ENSMUST00000215218 620 ntBASIC8.37□□□□□ -1.07
Col4a1P02463 Gm9535-201ENSMUST00000218499 768 ntBASIC8.37□□□□□ -1.07
Col4a1P02463 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC8.37□□□□□ -1.07
Col4a1P02463 Gm42763-201ENSMUST00000199595 2087 ntBASIC8.37□□□□□ -1.07
Col4a1P02463 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Col4a1P02463 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col4a1P02463 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC8.37□□□□□ -1.07
Col4a1P02463 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col4a1P02463 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Col4a1P02463 Tmem170b-201ENSMUST00000129449 7168 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Col4a1P02463 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Col4a1P02463 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC8.37□□□□□ -1.07
Col4a1P02463 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms