Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TcraP01849 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TcraP01849 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TcraP01849 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TcraP01849 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TcraP01849 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TcraP01849 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TcraP01849 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TcraP01849 Gm38195-201ENSMUST00000194247 1499 ntBASIC5.06□□□□□ -1.6
TcraP01849 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TcraP01849 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TcraP01849 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TcraP01849 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TcraP01849 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TcraP01849 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
TcraP01849 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TcraP01849 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TcraP01849 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.05□□□□□ -1.6
TcraP01849 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC5.05□□□□□ -1.6
TcraP01849 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TcraP01849 Phf7-206ENSMUST00000228437 1373 ntBASIC5.05□□□□□ -1.6
TcraP01849 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TcraP01849 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TcraP01849 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TcraP01849 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
TcraP01849 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TcraP01849 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TcraP01849 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC5.05□□□□□ -1.6
TcraP01849 Mir711-201ENSMUST00000102188 82 ntBASIC5.05□□□□□ -1.6
TcraP01849 Gm24462-201ENSMUST00000102430 106 ntBASIC5.05□□□□□ -1.6
TcraP01849 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TcraP01849 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TcraP01849 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TcraP01849 Tmem91-202ENSMUST00000108404 485 ntTSL 5 BASIC5.05□□□□□ -1.6
TcraP01849 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC5.05□□□□□ -1.6
TcraP01849 Gm4914-201ENSMUST00000119757 459 ntBASIC5.05□□□□□ -1.6
TcraP01849 Gm12632-201ENSMUST00000121223 495 ntBASIC5.05□□□□□ -1.6
TcraP01849 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TcraP01849 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC5.05□□□□□ -1.6
TcraP01849 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC5.05□□□□□ -1.6
TcraP01849 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC5.05□□□□□ -1.6
TcraP01849 Gm23220-201ENSMUST00000158115 137 ntBASIC5.05□□□□□ -1.6
TcraP01849 Gm8164-201ENSMUST00000169120 1192 ntBASIC5.05□□□□□ -1.6
TcraP01849 Gm4252-201ENSMUST00000174823 313 ntBASIC5.05□□□□□ -1.6
TcraP01849 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TcraP01849 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TcraP01849 Gm9274-201ENSMUST00000182505 984 ntBASIC5.05□□□□□ -1.6
TcraP01849 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TcraP01849 Gm29273-201ENSMUST00000188880 262 ntBASIC5.05□□□□□ -1.6
TcraP01849 Gm28443-201ENSMUST00000189081 698 ntBASIC5.05□□□□□ -1.6
TcraP01849 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TcraP01849 Gm36667-201ENSMUST00000196125 753 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TcraP01849 Gm43390-201ENSMUST00000196614 421 ntBASIC5.05□□□□□ -1.6
TcraP01849 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC5.05□□□□□ -1.6
TcraP01849 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC5.05□□□□□ -1.6
TcraP01849 Gm43815-201ENSMUST00000197676 990 ntBASIC5.05□□□□□ -1.6
TcraP01849 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TcraP01849 Gm19254-201ENSMUST00000204828 294 ntBASIC5.05□□□□□ -1.6
TcraP01849 Gm29977-201ENSMUST00000206804 724 ntBASIC5.05□□□□□ -1.6
TcraP01849 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.05□□□□□ -1.6
TcraP01849 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC5.05□□□□□ -1.6
TcraP01849 RMST_1.1-214ENSMUST00000220389 633 ntTSL 2 BASIC5.05□□□□□ -1.6
TcraP01849 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC5.05□□□□□ -1.6
TcraP01849 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TcraP01849 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TcraP01849 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TcraP01849 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TcraP01849 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TcraP01849 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TcraP01849 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TcraP01849 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TcraP01849 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
TcraP01849 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TcraP01849 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TcraP01849 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TcraP01849 Gm14935-201ENSMUST00000121528 1708 ntBASIC5.05□□□□□ -1.6
TcraP01849 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TcraP01849 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TcraP01849 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.05□□□□□ -1.6
TcraP01849 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
TcraP01849 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TcraP01849 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TcraP01849 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TcraP01849 Gm43557-201ENSMUST00000197100 2370 ntBASIC5.05□□□□□ -1.6
TcraP01849 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TcraP01849 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TcraP01849 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
TcraP01849 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TcraP01849 Gm45073-201ENSMUST00000207688 4247 ntBASIC5.05□□□□□ -1.6
TcraP01849 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TcraP01849 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
TcraP01849 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TcraP01849 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TcraP01849 Gm37913-201ENSMUST00000192925 2544 ntBASIC5.04□□□□□ -1.6
TcraP01849 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TcraP01849 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TcraP01849 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TcraP01849 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
TcraP01849 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
TcraP01849 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms