Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 AC160635.1-201ENSMUST00000216731 474 ntBASIC6.59□□□□□ -1.35
Use1Q9CQ56 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC6.59□□□□□ -1.35
Use1Q9CQ56 A1cf-203ENSMUST00000224400 1204 ntBASIC6.59□□□□□ -1.35
Use1Q9CQ56 AC125087.1-201ENSMUST00000227552 514 ntBASIC6.59□□□□□ -1.35
Use1Q9CQ56 AC125405.2-201ENSMUST00000227862 383 ntBASIC6.59□□□□□ -1.35
Use1Q9CQ56 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC6.59□□□□□ -1.35
Use1Q9CQ56 Snora21-201ENSMUST00000082967 137 ntBASIC6.59□□□□□ -1.35
Use1Q9CQ56 Gm26130-201ENSMUST00000083171 138 ntBASIC6.59□□□□□ -1.35
Use1Q9CQ56 Gm7493-201ENSMUST00000085919 626 ntBASIC6.59□□□□□ -1.35
Use1Q9CQ56 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Use1Q9CQ56 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Use1Q9CQ56 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
Use1Q9CQ56 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Use1Q9CQ56 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Use1Q9CQ56 AC126549.1-201ENSMUST00000225044 3687 ntBASIC6.59□□□□□ -1.35
Use1Q9CQ56 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.59□□□□□ -1.35
Use1Q9CQ56 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC6.59□□□□□ -1.35
Use1Q9CQ56 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.59□□□□□ -1.35
Use1Q9CQ56 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Use1Q9CQ56 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Use1Q9CQ56 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Use1Q9CQ56 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Use1Q9CQ56 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Use1Q9CQ56 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Use1Q9CQ56 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Use1Q9CQ56 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Use1Q9CQ56 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Use1Q9CQ56 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Use1Q9CQ56 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Use1Q9CQ56 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC6.58□□□□□ -1.36
Use1Q9CQ56 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Gm19801-201ENSMUST00000218231 1882 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
Use1Q9CQ56 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Use1Q9CQ56 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Use1Q9CQ56 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Use1Q9CQ56 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Use1Q9CQ56 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Use1Q9CQ56 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Use1Q9CQ56 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.58□□□□□ -1.36
Use1Q9CQ56 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Use1Q9CQ56 Gm25725-201ENSMUST00000104528 130 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Gm14480-201ENSMUST00000118521 433 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Gm12740-201ENSMUST00000118794 308 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Use1Q9CQ56 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Use1Q9CQ56 Gm22206-201ENSMUST00000158612 116 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Gm16184-201ENSMUST00000162324 573 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC6.58□□□□□ -1.36
Use1Q9CQ56 Gm4956-202ENSMUST00000178869 672 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Use1Q9CQ56 Gm27373-201ENSMUST00000184017 184 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Gm5334-201ENSMUST00000187472 720 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Gm28413-201ENSMUST00000189369 291 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Gm28145-201ENSMUST00000189742 380 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Gm36928-201ENSMUST00000192466 694 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Gm37325-201ENSMUST00000194971 694 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Gm38079-201ENSMUST00000195603 154 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Gm43656-201ENSMUST00000197882 434 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC6.58□□□□□ -1.36
Use1Q9CQ56 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC6.58□□□□□ -1.36
Use1Q9CQ56 Gm44971-201ENSMUST00000206192 337 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC6.58□□□□□ -1.36
Use1Q9CQ56 AC133948.2-201ENSMUST00000217850 378 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC6.58□□□□□ -1.36
Use1Q9CQ56 AC158531.2-201ENSMUST00000224264 473 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Use1Q9CQ56 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Use1Q9CQ56 Olfr683-201ENSMUST00000061284 960 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC6.58□□□□□ -1.36
Use1Q9CQ56 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Use1Q9CQ56 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Use1Q9CQ56 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Use1Q9CQ56 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Gm37525-201ENSMUST00000193499 2871 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Use1Q9CQ56 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Gm7961-201ENSMUST00000201338 1436 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Mbnl2-203ENSMUST00000226800 3328 ntBASIC6.58□□□□□ -1.36
Use1Q9CQ56 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Use1Q9CQ56 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Gm3555-201ENSMUST00000160287 1395 ntBASIC6.57□□□□□ -1.36
Use1Q9CQ56 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Gm15930-201ENSMUST00000156603 2037 ntBASIC6.57□□□□□ -1.36
Use1Q9CQ56 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Gm7803-201ENSMUST00000117176 1015 ntBASIC6.57□□□□□ -1.36
Use1Q9CQ56 Gm14248-201ENSMUST00000117790 544 ntBASIC6.57□□□□□ -1.36
Use1Q9CQ56 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC6.57□□□□□ -1.36
Use1Q9CQ56 Gm12944-201ENSMUST00000119262 463 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms