Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Nkx6-1Q99MA9 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Nkx6-1Q99MA9 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC7.26□□□□□ -1.25
Nkx6-1Q99MA9 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC7.26□□□□□ -1.25
Nkx6-1Q99MA9 Zfp958-201ENSMUST00000073201 1401 ntTSL 5 BASIC7.26□□□□□ -1.25
Nkx6-1Q99MA9 Tmem18-201ENSMUST00000057151 2971 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Nkx6-1Q99MA9 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Nkx6-1Q99MA9 Nxpe4-202ENSMUST00000215780 2875 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Nkx6-1Q99MA9 1700034I23Rik-201ENSMUST00000099123 2348 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Nkx6-1Q99MA9 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Nkx6-1Q99MA9 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Aoah-201ENSMUST00000021757 2921 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm44883-201ENSMUST00000206063 3258 ntBASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Platr30-202ENSMUST00000199348 1934 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Klhl5-201ENSMUST00000101191 3610 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm5361-201ENSMUST00000211041 1498 ntBASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gsdmc2-203ENSMUST00000188691 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm15105-201ENSMUST00000117777 204 ntBASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm12287-201ENSMUST00000119770 707 ntBASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm13525-201ENSMUST00000120607 478 ntBASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Mup-ps13-201ENSMUST00000120662 545 ntBASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Mup-ps1-201ENSMUST00000120720 544 ntBASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm25179-201ENSMUST00000122632 128 ntBASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm23059-201ENSMUST00000158978 107 ntBASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm9027-201ENSMUST00000165914 661 ntBASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Cfhr3-201ENSMUST00000170441 1022 ntBASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm24155-201ENSMUST00000175259 110 ntBASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Mir6908-201ENSMUST00000184056 63 ntBASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm9931-201ENSMUST00000193584 1185 ntBASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm18599-201ENSMUST00000206729 1125 ntBASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 AC132121.1-201ENSMUST00000220774 332 ntBASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm25810-201ENSMUST00000082752 108 ntBASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 AC170188.1-201ENSMUST00000223710 1963 ntBASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gfpt2-201ENSMUST00000020629 2947 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 CT010453.1-201ENSMUST00000226795 2201 ntBASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm40309-201ENSMUST00000202699 1752 ntBASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm44763-201ENSMUST00000208287 2019 ntBASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm37022-201ENSMUST00000192517 2254 ntBASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Nkx6-1Q99MA9 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Nkx6-1Q99MA9 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Nkx6-1Q99MA9 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Nkx6-1Q99MA9 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Nkx6-1Q99MA9 Gm6284-201ENSMUST00000209609 4287 ntBASIC7.24□□□□□ -1.25
Nkx6-1Q99MA9 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Nkx6-1Q99MA9 Vmn2r55-202ENSMUST00000172743 2346 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Nkx6-1Q99MA9 Zmym5-201ENSMUST00000039812 5290 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Nkx6-1Q99MA9 Gm5715-201ENSMUST00000196854 1465 ntBASIC7.24□□□□□ -1.25
Nkx6-1Q99MA9 Myo1f-201ENSMUST00000087605 3819 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Nkx6-1Q99MA9 Tro-205ENSMUST00000151403 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Nkx6-1Q99MA9 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Nkx6-1Q99MA9 Pnma2-202ENSMUST00000122431 3143 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Nkx6-1Q99MA9 Pcdh15-228ENSMUST00000152819 2867 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms