Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Gm38200-201ENSMUST00000192083 2111 ntBASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Gm45887-201ENSMUST00000212672 2998 ntBASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Gm6011-201ENSMUST00000211736 1796 ntBASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Gm12635-201ENSMUST00000117285 752 ntBASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Gm6743-201ENSMUST00000117345 1066 ntBASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Gm12710-201ENSMUST00000119011 216 ntBASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Gm27218-201ENSMUST00000183745 392 ntBASIC8.28□□□□□ -1.08
Vps53Q8CCB4 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Gm20223-201ENSMUST00000199932 805 ntBASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 AC122459.3-201ENSMUST00000228508 1042 ntBASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Gm9985-201ENSMUST00000044101 510 ntBASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 n-R5s29-201ENSMUST00000082836 119 ntBASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Mir7b-201ENSMUST00000083557 111 ntBASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Gm18726-201ENSMUST00000218175 2010 ntBASIC8.28□□□□□ -1.08
Vps53Q8CCB4 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Gm37906-201ENSMUST00000192050 3035 ntBASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Vps53Q8CCB4 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Vps53Q8CCB4 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Vps53Q8CCB4 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Vps53Q8CCB4 Gm29670-201ENSMUST00000190228 2491 ntBASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC8.27□□□□□ -1.09
Vps53Q8CCB4 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Gm21152-201ENSMUST00000190271 3483 ntBASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Gm23888-201ENSMUST00000122690 253 ntBASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Gm8046-201ENSMUST00000172151 616 ntBASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Vps53Q8CCB4 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Gm43212-201ENSMUST00000198208 394 ntBASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Gm43849-201ENSMUST00000201086 215 ntBASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Gm45276-201ENSMUST00000209549 1086 ntBASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Gm18562-201ENSMUST00000209949 915 ntBASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC8.27□□□□□ -1.09
Vps53Q8CCB4 AC127224.1-201ENSMUST00000218094 453 ntBASIC8.27□□□□□ -1.09
Vps53Q8CCB4 CT030238.4-202ENSMUST00000226143 745 ntBASIC8.27□□□□□ -1.09
Vps53Q8CCB4 AC123533.2-201ENSMUST00000228176 375 ntBASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Gm22504-201ENSMUST00000082963 139 ntBASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Vps53Q8CCB4 AC135119.1-202ENSMUST00000228435 2203 ntBASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Gm18537-202ENSMUST00000206215 1503 ntBASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Gm44553-201ENSMUST00000206316 2037 ntBASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Gm45657-201ENSMUST00000211318 1349 ntBASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Vps53Q8CCB4 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms