Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm2a-201ENSMUST00000000608 4127 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trim35Q8C006 Arhgap45-201ENSMUST00000043311 3499 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trim35Q8C006 Gm17816-201ENSMUST00000219991 2603 ntBASIC9.75□□□□□ -0.85
Trim35Q8C006 Hdac4-202ENSMUST00000097644 8100 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trim35Q8C006 Abcc12-205ENSMUST00000152438 3083 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trim35Q8C006 Map4k4-218ENSMUST00000195860 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trim35Q8C006 Ccdc148-201ENSMUST00000077687 3977 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trim35Q8C006 Col19a1-201ENSMUST00000051344 3336 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trim35Q8C006 Rad51b-201ENSMUST00000079533 1759 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trim35Q8C006 Gm37464-201ENSMUST00000192431 2220 ntBASIC9.75□□□□□ -0.85
Trim35Q8C006 Tec-201ENSMUST00000071944 2659 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trim35Q8C006 Mpp2-202ENSMUST00000100398 3577 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trim35Q8C006 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trim35Q8C006 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trim35Q8C006 Gm30373-202ENSMUST00000217507 2709 ntTSL 5 BASIC9.75□□□□□ -0.85
Trim35Q8C006 Gm32552-201ENSMUST00000217849 2291 ntTSL 5 BASIC9.75□□□□□ -0.85
Trim35Q8C006 Lrba-201ENSMUST00000107635 9888 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trim35Q8C006 Tmem74bos-202ENSMUST00000149319 2090 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trim35Q8C006 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 Ankdd1b-201ENSMUST00000055607 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 Parp10-201ENSMUST00000075689 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 Smc2-201ENSMUST00000102915 5404 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 Diaph1-203ENSMUST00000115629 5416 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Trim35Q8C006 Tmem19-204ENSMUST00000217887 3084 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 Sec23ip-201ENSMUST00000042942 4505 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 Tmem52b-201ENSMUST00000032263 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm44095-201ENSMUST00000204631 1931 ntBASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm45153-201ENSMUST00000205957 1901 ntBASIC9.74□□□□□ -0.85
Trim35Q8C006 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
Trim35Q8C006 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Trim35Q8C006 Igf1r-201ENSMUST00000005671 11409 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 C78197-201ENSMUST00000152781 3417 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 Plekha2-201ENSMUST00000064883 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 Epn2-201ENSMUST00000001063 4243 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 Trim17-202ENSMUST00000075141 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 Lrrc14b-201ENSMUST00000022064 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm37036-201ENSMUST00000192836 2506 ntBASIC9.74□□□□□ -0.85
Trim35Q8C006 Plcd4-202ENSMUST00000067916 4552 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm24265-201ENSMUST00000101833 141 ntBASIC9.74□□□□□ -0.85
Trim35Q8C006 Mir598-201ENSMUST00000102094 79 ntBASIC9.74□□□□□ -0.85
Trim35Q8C006 Mir804-201ENSMUST00000103251 95 ntBASIC9.74□□□□□ -0.85
Trim35Q8C006 0610037L13Rik-203ENSMUST00000106726 515 ntTSL 5 BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gps2-203ENSMUST00000116358 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm12645-201ENSMUST00000117297 275 ntBASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm12168-201ENSMUST00000119051 368 ntBASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm12402-201ENSMUST00000120536 334 ntBASIC9.74□□□□□ -0.85
Trim35Q8C006 Mettl8-205ENSMUST00000121586 1151 ntTSL 5 BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm6881-201ENSMUST00000121811 833 ntBASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm11513-201ENSMUST00000138855 751 ntTSL 5 BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC9.74□□□□□ -0.85
Trim35Q8C006 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 Pcsk2os1-202ENSMUST00000156780 527 ntTSL 3 BASIC9.74□□□□□ -0.85
Trim35Q8C006 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm3752-202ENSMUST00000167833 450 ntTSL 5 BASIC9.74□□□□□ -0.85
Trim35Q8C006 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC9.74□□□□□ -0.85
Trim35Q8C006 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm2956-202ENSMUST00000178722 450 ntTSL 5 BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm21963-201ENSMUST00000179519 330 ntBASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm5527-201ENSMUST00000179821 642 ntBASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm26959-201ENSMUST00000182376 978 ntBASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm8756-201ENSMUST00000183250 929 ntBASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm27203-201ENSMUST00000183677 307 ntBASIC9.74□□□□□ -0.85
Trim35Q8C006 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC9.74□□□□□ -0.85
Trim35Q8C006 Igkv13-64-201ENSMUST00000198143 343 ntBASIC9.74□□□□□ -0.85
Trim35Q8C006 AC157931.1-201ENSMUST00000198565 346 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm34248-201ENSMUST00000200027 474 ntBASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm6719-201ENSMUST00000202067 335 ntBASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm33024-201ENSMUST00000203143 633 ntTSL 3 BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm44336-201ENSMUST00000203696 468 ntBASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm2676-201ENSMUST00000207279 606 ntBASIC9.74□□□□□ -0.85
Trim35Q8C006 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm2754-201ENSMUST00000223383 589 ntBASIC9.74□□□□□ -0.85
Trim35Q8C006 Apom-201ENSMUST00000025249 1013 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gucd1-202ENSMUST00000118936 2843 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm14849-201ENSMUST00000122293 2846 ntBASIC9.74□□□□□ -0.85
Trim35Q8C006 Olfr943-202ENSMUST00000213176 8275 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Trim35Q8C006 Ctbp2-214ENSMUST00000169570 3604 ntTSL 5 BASIC9.74□□□□□ -0.85
Trim35Q8C006 Dicer1-201ENSMUST00000041987 9851 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 Amy2b-201ENSMUST00000120184 1577 ntBASIC9.74□□□□□ -0.85
Trim35Q8C006 AU018091-201ENSMUST00000171749 3449 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 Plekhs1-202ENSMUST00000178590 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 Plekhs1-201ENSMUST00000039666 2378 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 Gm4810-201ENSMUST00000177721 1607 ntBASIC9.74□□□□□ -0.85
Trim35Q8C006 Itga9-202ENSMUST00000124360 1935 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim35Q8C006 AC115746.1-201ENSMUST00000228949 3617 ntBASIC9.74□□□□□ -0.85
Trim35Q8C006 Rab7b-201ENSMUST00000064664 1672 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms