Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC9.83□□□□□ -0.84
Usp47Q8BY87 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Usp47Q8BY87 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Usp47Q8BY87 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Usp47Q8BY87 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Usp47Q8BY87 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Usp47Q8BY87 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Usp47Q8BY87 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Usp47Q8BY87 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Usp47Q8BY87 Gm11501-201ENSMUST00000118039 581 ntBASIC9.83□□□□□ -0.84
Usp47Q8BY87 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Usp47Q8BY87 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC9.83□□□□□ -0.84
Usp47Q8BY87 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC9.83□□□□□ -0.84
Usp47Q8BY87 Gm25722-201ENSMUST00000157498 279 ntBASIC9.83□□□□□ -0.84
Usp47Q8BY87 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Usp47Q8BY87 Gm26570-201ENSMUST00000180672 342 ntBASIC9.83□□□□□ -0.84
Usp47Q8BY87 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC9.83□□□□□ -0.84
Usp47Q8BY87 Gm29156-201ENSMUST00000187764 499 ntBASIC9.83□□□□□ -0.84
Usp47Q8BY87 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC9.83□□□□□ -0.84
Usp47Q8BY87 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC9.83□□□□□ -0.84
Usp47Q8BY87 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Usp47Q8BY87 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC9.83□□□□□ -0.84
Usp47Q8BY87 Mir106b-201ENSMUST00000083580 82 ntBASIC9.83□□□□□ -0.84
Usp47Q8BY87 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Usp47Q8BY87 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Usp47Q8BY87 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Usp47Q8BY87 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Usp47Q8BY87 Gm5454-201ENSMUST00000052030 1453 ntBASIC9.83□□□□□ -0.84
Usp47Q8BY87 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Usp47Q8BY87 Gm44553-201ENSMUST00000206316 2037 ntBASIC9.83□□□□□ -0.84
Usp47Q8BY87 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Usp47Q8BY87 Gm28583-201ENSMUST00000188903 2141 ntBASIC9.83□□□□□ -0.84
Usp47Q8BY87 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC9.83□□□□□ -0.84
Usp47Q8BY87 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp47Q8BY87 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp47Q8BY87 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp47Q8BY87 Gm16025-202ENSMUST00000161923 2425 ntTSL 2 BASIC9.82□□□□□ -0.84
Usp47Q8BY87 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Usp47Q8BY87 Gm43789-201ENSMUST00000199275 2472 ntBASIC9.82□□□□□ -0.84
Usp47Q8BY87 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp47Q8BY87 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp47Q8BY87 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp47Q8BY87 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp47Q8BY87 Gm12713-201ENSMUST00000118404 764 ntBASIC9.82□□□□□ -0.84
Usp47Q8BY87 Gm25717-201ENSMUST00000158631 353 ntBASIC9.82□□□□□ -0.84
Usp47Q8BY87 Gm24155-201ENSMUST00000175259 110 ntBASIC9.82□□□□□ -0.84
Usp47Q8BY87 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Usp47Q8BY87 Gm44823-201ENSMUST00000204775 1107 ntBASIC9.82□□□□□ -0.84
Usp47Q8BY87 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC9.82□□□□□ -0.84
Usp47Q8BY87 AL929555.1-201ENSMUST00000215283 509 ntBASIC9.82□□□□□ -0.84
Usp47Q8BY87 AC154834.1-201ENSMUST00000224697 358 ntBASIC9.82□□□□□ -0.84
Usp47Q8BY87 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Usp47Q8BY87 Mir135a-1-201ENSMUST00000083473 90 ntBASIC9.82□□□□□ -0.84
Usp47Q8BY87 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Usp47Q8BY87 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Usp47Q8BY87 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Usp47Q8BY87 Gm38173-201ENSMUST00000193126 2314 ntBASIC9.82□□□□□ -0.84
Usp47Q8BY87 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Usp47Q8BY87 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp47Q8BY87 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp47Q8BY87 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp47Q8BY87 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp47Q8BY87 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Usp47Q8BY87 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Usp47Q8BY87 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Usp47Q8BY87 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC9.81□□□□□ -0.84
Usp47Q8BY87 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Usp47Q8BY87 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Usp47Q8BY87 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Usp47Q8BY87 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp47Q8BY87 Gm12573-201ENSMUST00000118158 286 ntBASIC9.81□□□□□ -0.84
Usp47Q8BY87 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Usp47Q8BY87 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC9.81□□□□□ -0.84
Usp47Q8BY87 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp47Q8BY87 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Usp47Q8BY87 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp47Q8BY87 Gm27804-201ENSMUST00000185135 119 ntBASIC9.81□□□□□ -0.84
Usp47Q8BY87 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC9.81□□□□□ -0.84
Usp47Q8BY87 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC9.81□□□□□ -0.84
Usp47Q8BY87 Gm4751-201ENSMUST00000200620 1105 ntBASIC9.81□□□□□ -0.84
Usp47Q8BY87 Gm44279-201ENSMUST00000205154 472 ntBASIC9.81□□□□□ -0.84
Usp47Q8BY87 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC9.81□□□□□ -0.84
Usp47Q8BY87 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC9.81□□□□□ -0.84
Usp47Q8BY87 Olfr809-203ENSMUST00000218237 1100 ntBASIC9.81□□□□□ -0.84
Usp47Q8BY87 Gm7252-201ENSMUST00000223284 456 ntBASIC9.81□□□□□ -0.84
Usp47Q8BY87 CT030238.4-202ENSMUST00000226143 745 ntBASIC9.81□□□□□ -0.84
Usp47Q8BY87 AC132833.4-201ENSMUST00000228313 203 ntBASIC9.81□□□□□ -0.84
Usp47Q8BY87 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp47Q8BY87 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Usp47Q8BY87 Grik1-209ENSMUST00000227986 2942 ntBASIC9.81□□□□□ -0.84
Usp47Q8BY87 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC9.81□□□□□ -0.84
Usp47Q8BY87 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp47Q8BY87 Gm44898-201ENSMUST00000205934 2223 ntBASIC9.81□□□□□ -0.84
Usp47Q8BY87 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp47Q8BY87 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp47Q8BY87 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Usp47Q8BY87 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Usp47Q8BY87 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp47Q8BY87 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC9.81□□□□□ -0.84
Usp47Q8BY87 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms