Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm42804-201ENSMUST00000199701 178 ntBASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Gm3511-201ENSMUST00000199823 204 ntBASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Gm2398-201ENSMUST00000218347 883 ntBASIC7.81□□□□□ -1.16
Usp49Q6P9L4 AC163660.1-201ENSMUST00000223696 818 ntBASIC7.81□□□□□ -1.16
Usp49Q6P9L4 A1cf-203ENSMUST00000224400 1204 ntBASIC7.81□□□□□ -1.16
Usp49Q6P9L4 AC154380.1-201ENSMUST00000226804 720 ntBASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp49Q6P9L4 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp49Q6P9L4 Gm43876-201ENSMUST00000203831 3229 ntBASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Gm15129-201ENSMUST00000119673 279 ntBASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Gm13724-201ENSMUST00000122395 1155 ntBASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Gm16357-201ENSMUST00000144091 474 ntBASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Gm26183-201ENSMUST00000157685 139 ntBASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Gm8185-201ENSMUST00000160999 669 ntBASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Gm20637-201ENSMUST00000175715 462 ntBASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Gm8245-201ENSMUST00000182434 987 ntBASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Mir7212-201ENSMUST00000184098 61 ntBASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Gm28958-201ENSMUST00000185864 703 ntBASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Gm38373-201ENSMUST00000192042 288 ntBASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Gm37883-201ENSMUST00000194970 725 ntBASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Gm5050-201ENSMUST00000197164 775 ntBASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Gm6681-201ENSMUST00000205215 607 ntBASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Gm10126-201ENSMUST00000221732 168 ntBASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Gm19238-201ENSMUST00000221936 1260 ntBASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 AC154849.2-201ENSMUST00000223781 974 ntBASIC7.8□□□□□ -1.16
Usp49Q6P9L4 AC114573.1-201ENSMUST00000224120 1210 ntBASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Gm23734-201ENSMUST00000083753 109 ntBASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Gm14935-201ENSMUST00000121528 1708 ntBASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Usp49Q6P9L4 CT030185.1-201ENSMUST00000222940 2289 ntBASIC7.8□□□□□ -1.16
Usp49Q6P9L4 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
Usp49Q6P9L4 AC107452.3-201ENSMUST00000228807 1308 ntBASIC7.79□□□□□ -1.16
Usp49Q6P9L4 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Usp49Q6P9L4 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Usp49Q6P9L4 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
Usp49Q6P9L4 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC7.79□□□□□ -1.16
Usp49Q6P9L4 AC126549.1-201ENSMUST00000225044 3687 ntBASIC7.79□□□□□ -1.16
Usp49Q6P9L4 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Usp49Q6P9L4 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Usp49Q6P9L4 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp49Q6P9L4 Gm13930-201ENSMUST00000118569 368 ntBASIC7.79□□□□□ -1.16
Usp49Q6P9L4 Gm11726-201ENSMUST00000121028 424 ntBASIC7.79□□□□□ -1.16
Usp49Q6P9L4 Gm16107-201ENSMUST00000162523 862 ntBASIC7.79□□□□□ -1.16
Usp49Q6P9L4 Esd-ps-201ENSMUST00000170684 847 ntBASIC7.79□□□□□ -1.16
Usp49Q6P9L4 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp49Q6P9L4 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
Usp49Q6P9L4 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
Usp49Q6P9L4 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Usp49Q6P9L4 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC7.79□□□□□ -1.16
Usp49Q6P9L4 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Usp49Q6P9L4 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC7.79□□□□□ -1.16
Usp49Q6P9L4 Gm18860-201ENSMUST00000212029 764 ntBASIC7.79□□□□□ -1.16
Usp49Q6P9L4 AC122397.3-201ENSMUST00000227097 527 ntBASIC7.79□□□□□ -1.16
Usp49Q6P9L4 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Usp49Q6P9L4 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Usp49Q6P9L4 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Usp49Q6P9L4 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp49Q6P9L4 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp49Q6P9L4 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp49Q6P9L4 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Usp49Q6P9L4 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC7.79□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms