Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
AtmQ62388 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
AtmQ62388 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 Gm24230-201ENSMUST00000104313 129 ntBASIC6.39□□□□□ -1.39
AtmQ62388 Gm7931-201ENSMUST00000121537 271 ntBASIC6.39□□□□□ -1.39
AtmQ62388 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC6.39□□□□□ -1.39
AtmQ62388 Gm22420-201ENSMUST00000178795 126 ntBASIC6.39□□□□□ -1.39
AtmQ62388 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC6.39□□□□□ -1.39
AtmQ62388 Gm28017-201ENSMUST00000183434 126 ntBASIC6.39□□□□□ -1.39
AtmQ62388 Gm44471-201ENSMUST00000197963 100 ntBASIC6.39□□□□□ -1.39
AtmQ62388 Gm5373-201ENSMUST00000212113 1050 ntBASIC6.39□□□□□ -1.39
AtmQ62388 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.39□□□□□ -1.39
AtmQ62388 Gm3266-201ENSMUST00000217832 591 ntBASIC6.39□□□□□ -1.39
AtmQ62388 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 Gm8107-201ENSMUST00000117477 2009 ntBASIC6.39□□□□□ -1.39
AtmQ62388 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 AC139750.1-201ENSMUST00000223962 1300 ntBASIC6.39□□□□□ -1.39
AtmQ62388 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 AC122828.2-201ENSMUST00000222511 2880 ntBASIC6.39□□□□□ -1.39
AtmQ62388 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 CT009757.6-201ENSMUST00000220661 2312 ntBASIC6.39□□□□□ -1.39
AtmQ62388 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
AtmQ62388 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
AtmQ62388 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.39□□□□□ -1.39
AtmQ62388 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 Gm15709-201ENSMUST00000118354 213 ntBASIC6.39□□□□□ -1.39
AtmQ62388 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC6.39□□□□□ -1.39
AtmQ62388 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC6.39□□□□□ -1.39
AtmQ62388 Gm37295-201ENSMUST00000192186 109 ntBASIC6.39□□□□□ -1.39
AtmQ62388 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 Gm19211-201ENSMUST00000200251 1206 ntBASIC6.39□□□□□ -1.39
AtmQ62388 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC6.39□□□□□ -1.39
AtmQ62388 AC134537.2-201ENSMUST00000217770 575 ntBASIC6.39□□□□□ -1.39
AtmQ62388 Gm6049-201ENSMUST00000222369 458 ntBASIC6.39□□□□□ -1.39
AtmQ62388 AC161586.1-201ENSMUST00000223232 547 ntBASIC6.39□□□□□ -1.39
AtmQ62388 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 Olfr63-203ENSMUST00000217023 7023 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
AtmQ62388 Hypk-202ENSMUST00000110612 4170 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
AtmQ62388 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
AtmQ62388 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 Olfr1509-202ENSMUST00000205900 2444 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
AtmQ62388 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
AtmQ62388 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC6.39□□□□□ -1.39
AtmQ62388 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC6.39□□□□□ -1.39
AtmQ62388 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 Gm18728-201ENSMUST00000186155 753 ntBASIC6.39□□□□□ -1.39
AtmQ62388 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 Gm20932-201ENSMUST00000189115 694 ntBASIC6.39□□□□□ -1.39
AtmQ62388 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AtmQ62388 Gm37358-201ENSMUST00000195492 479 ntBASIC6.39□□□□□ -1.39
AtmQ62388 Gm18805-201ENSMUST00000206872 655 ntBASIC6.39□□□□□ -1.39
AtmQ62388 Gm9535-201ENSMUST00000218499 768 ntBASIC6.39□□□□□ -1.39
AtmQ62388 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
AtmQ62388 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
AtmQ62388 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
AtmQ62388 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
AtmQ62388 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
AtmQ62388 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC6.38□□□□□ -1.39
AtmQ62388 Abhd2-201ENSMUST00000037315 6877 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
AtmQ62388 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.38□□□□□ -1.39
AtmQ62388 Arid1a-201ENSMUST00000008024 6486 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
AtmQ62388 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
AtmQ62388 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
AtmQ62388 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
AtmQ62388 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
AtmQ62388 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
AtmQ62388 Gm12193-201ENSMUST00000117250 379 ntBASIC6.38□□□□□ -1.39
AtmQ62388 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
AtmQ62388 Gm23674-201ENSMUST00000157473 131 ntBASIC6.38□□□□□ -1.39
AtmQ62388 Gm19560-201ENSMUST00000177510 514 ntBASIC6.38□□□□□ -1.39
AtmQ62388 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
AtmQ62388 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
AtmQ62388 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
AtmQ62388 Gm38181-201ENSMUST00000181357 720 ntBASIC6.38□□□□□ -1.39
AtmQ62388 Gm28080-201ENSMUST00000188552 722 ntBASIC6.38□□□□□ -1.39
AtmQ62388 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
AtmQ62388 Gm37328-201ENSMUST00000193191 640 ntBASIC6.38□□□□□ -1.39
AtmQ62388 Gm18325-201ENSMUST00000203228 835 ntBASIC6.38□□□□□ -1.39
AtmQ62388 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC6.38□□□□□ -1.39
AtmQ62388 Gm45432-201ENSMUST00000210391 416 ntBASIC6.38□□□□□ -1.39
AtmQ62388 AC151971.3-201ENSMUST00000214694 404 ntBASIC6.38□□□□□ -1.39
AtmQ62388 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
AtmQ62388 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 107.6 ms