Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm44538-201ENSMUST00000205615 348 ntBASIC9.02□□□□□ -0.97
Smarcc1P97496 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC9.02□□□□□ -0.97
Smarcc1P97496 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC9.02□□□□□ -0.97
Smarcc1P97496 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smarcc1P97496 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC9.02□□□□□ -0.97
Smarcc1P97496 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC9.02□□□□□ -0.97
Smarcc1P97496 AC122533.1-201ENSMUST00000225177 767 ntBASIC9.02□□□□□ -0.97
Smarcc1P97496 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smarcc1P97496 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smarcc1P97496 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smarcc1P97496 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Smarcc1P97496 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Smarcc1P97496 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smarcc1P97496 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smarcc1P97496 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smarcc1P97496 CT009757.4-201ENSMUST00000221520 2541 ntBASIC9.02□□□□□ -0.97
Smarcc1P97496 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Smarcc1P97496 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
Smarcc1P97496 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Smarcc1P97496 Ocln-202ENSMUST00000069756 4052 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smarcc1P97496 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smarcc1P97496 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smarcc1P97496 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
Smarcc1P97496 Gm44165-201ENSMUST00000203093 1469 ntBASIC9.02□□□□□ -0.97
Smarcc1P97496 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smarcc1P97496 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Smarcc1P97496 Gm44117-201ENSMUST00000204442 1758 ntBASIC9.01□□□□□ -0.97
Smarcc1P97496 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smarcc1P97496 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Smarcc1P97496 Gm19031-201ENSMUST00000176280 1365 ntBASIC9.01□□□□□ -0.97
Smarcc1P97496 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smarcc1P97496 Gm42576-201ENSMUST00000202336 2846 ntBASIC9.01□□□□□ -0.97
Smarcc1P97496 AC130219.1-201ENSMUST00000228406 3433 ntBASIC9.01□□□□□ -0.97
Smarcc1P97496 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Smarcc1P97496 AC161247.1-201ENSMUST00000217744 2295 ntBASIC9.01□□□□□ -0.97
Smarcc1P97496 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC9.01□□□□□ -0.97
Smarcc1P97496 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
Smarcc1P97496 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Smarcc1P97496 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smarcc1P97496 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Smarcc1P97496 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC9.01□□□□□ -0.97
Smarcc1P97496 Gm16276-201ENSMUST00000131218 262 ntBASIC9.01□□□□□ -0.97
Smarcc1P97496 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC9.01□□□□□ -0.97
Smarcc1P97496 Gm25342-201ENSMUST00000157459 122 ntBASIC9.01□□□□□ -0.97
Smarcc1P97496 Gm23903-201ENSMUST00000157566 131 ntBASIC9.01□□□□□ -0.97
Smarcc1P97496 Gm22730-201ENSMUST00000158085 171 ntBASIC9.01□□□□□ -0.97
Smarcc1P97496 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Smarcc1P97496 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Smarcc1P97496 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smarcc1P97496 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC9.01□□□□□ -0.97
Smarcc1P97496 Gm37177-201ENSMUST00000193768 417 ntBASIC9.01□□□□□ -0.97
Smarcc1P97496 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC9.01□□□□□ -0.97
Smarcc1P97496 Gm44823-201ENSMUST00000204775 1107 ntBASIC9.01□□□□□ -0.97
Smarcc1P97496 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC9.01□□□□□ -0.97
Smarcc1P97496 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC9.01□□□□□ -0.97
Smarcc1P97496 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC9.01□□□□□ -0.97
Smarcc1P97496 Gm34424-201ENSMUST00000213400 782 ntBASIC9.01□□□□□ -0.97
Smarcc1P97496 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smarcc1P97496 AC122924.1-201ENSMUST00000222044 163 ntBASIC9.01□□□□□ -0.97
Smarcc1P97496 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Smarcc1P97496 Gm5514-201ENSMUST00000060477 306 ntBASIC9.01□□□□□ -0.97
Smarcc1P97496 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smarcc1P97496 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smarcc1P97496 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smarcc1P97496 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
Smarcc1P97496 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Smarcc1P97496 Gm43189-201ENSMUST00000196040 3069 ntBASIC9.01□□□□□ -0.97
Smarcc1P97496 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smarcc1P97496 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smarcc1P97496 Gm42479-201ENSMUST00000198654 1356 ntBASIC9□□□□□ -0.97
Smarcc1P97496 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smarcc1P97496 Tgfb3-201ENSMUST00000003687 3383 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smarcc1P97496 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
Smarcc1P97496 Gm13821-201ENSMUST00000202029 3201 ntBASIC9□□□□□ -0.97
Smarcc1P97496 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smarcc1P97496 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Smarcc1P97496 AC136019.1-201ENSMUST00000226503 1412 ntBASIC9□□□□□ -0.97
Smarcc1P97496 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smarcc1P97496 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC9□□□□□ -0.97
Smarcc1P97496 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC9□□□□□ -0.97
Smarcc1P97496 Gm25109-201ENSMUST00000122474 114 ntBASIC9□□□□□ -0.97
Smarcc1P97496 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Smarcc1P97496 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC9□□□□□ -0.97
Smarcc1P97496 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smarcc1P97496 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC9□□□□□ -0.97
Smarcc1P97496 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Smarcc1P97496 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Smarcc1P97496 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Smarcc1P97496 Gm29141-201ENSMUST00000190357 882 ntBASIC9□□□□□ -0.97
Smarcc1P97496 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smarcc1P97496 AC122844.1-201ENSMUST00000195971 107 ntBASIC9□□□□□ -0.97
Smarcc1P97496 Gm42584-201ENSMUST00000201404 220 ntBASIC9□□□□□ -0.97
Smarcc1P97496 Gm43748-201ENSMUST00000202329 1233 ntBASIC9□□□□□ -0.97
Smarcc1P97496 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC9□□□□□ -0.97
Smarcc1P97496 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC9□□□□□ -0.97
Smarcc1P97496 AC124601.1-201ENSMUST00000220531 135 ntBASIC9□□□□□ -0.97
Smarcc1P97496 AC096628.1-201ENSMUST00000226060 641 ntBASIC9□□□□□ -0.97
Smarcc1P97496 Gm42668-201ENSMUST00000200747 2487 ntBASIC9□□□□□ -0.97
Smarcc1P97496 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Smarcc1P97496 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms