Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC6.15□□□□□ -1.42
Nkx3-1P97436 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC6.15□□□□□ -1.42
Nkx3-1P97436 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC6.15□□□□□ -1.42
Nkx3-1P97436 AC079644.2-201ENSMUST00000220581 322 ntBASIC6.15□□□□□ -1.42
Nkx3-1P97436 AC163621.1-201ENSMUST00000220695 379 ntBASIC6.15□□□□□ -1.42
Nkx3-1P97436 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC6.15□□□□□ -1.42
Nkx3-1P97436 AC126554.3-201ENSMUST00000223131 493 ntBASIC6.15□□□□□ -1.42
Nkx3-1P97436 AC124489.3-201ENSMUST00000224037 278 ntBASIC6.15□□□□□ -1.42
Nkx3-1P97436 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Nkx3-1P97436 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Nkx3-1P97436 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Nkx3-1P97436 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Nkx3-1P97436 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Nkx3-1P97436 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
Nkx3-1P97436 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Nkx3-1P97436 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Nkx3-1P97436 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Nkx3-1P97436 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.43
Nkx3-1P97436 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC6.15□□□□□ -1.43
Nkx3-1P97436 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Nkx3-1P97436 AC154270.2-201ENSMUST00000226755 2306 ntBASIC6.15□□□□□ -1.43
Nkx3-1P97436 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Nkx3-1P97436 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Nkx3-1P97436 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Nkx3-1P97436 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.43
Nkx3-1P97436 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Nkx3-1P97436 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Nkx3-1P97436 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Nkx3-1P97436 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Nkx3-1P97436 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC6.15□□□□□ -1.43
Nkx3-1P97436 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC6.14□□□□□ -1.43
Nkx3-1P97436 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm45537-201ENSMUST00000211539 2708 ntBASIC6.14□□□□□ -1.43
Nkx3-1P97436 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm21781-201ENSMUST00000178920 4838 ntBASIC6.14□□□□□ -1.43
Nkx3-1P97436 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm22256-201ENSMUST00000102291 107 ntBASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm16073-201ENSMUST00000116032 517 ntBASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC6.14□□□□□ -1.43
Nkx3-1P97436 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Mir1929-201ENSMUST00000158635 93 ntBASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm24545-201ENSMUST00000158651 85 ntBASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm28952-201ENSMUST00000189285 681 ntBASIC6.14□□□□□ -1.43
Nkx3-1P97436 Ighv8-3-201ENSMUST00000194985 295 ntBASIC6.14□□□□□ -1.43
Nkx3-1P97436 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm43656-201ENSMUST00000197882 434 ntBASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm43772-201ENSMUST00000202052 379 ntBASIC6.14□□□□□ -1.43
Nkx3-1P97436 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC6.14□□□□□ -1.43
Nkx3-1P97436 AC148328.2-201ENSMUST00000216960 262 ntBASIC6.14□□□□□ -1.43
Nkx3-1P97436 AC153152.2-201ENSMUST00000223165 959 ntBASIC6.14□□□□□ -1.43
Nkx3-1P97436 AC164294.1-201ENSMUST00000224682 688 ntBASIC6.14□□□□□ -1.43
Nkx3-1P97436 AC156574.1-201ENSMUST00000227084 452 ntBASIC6.14□□□□□ -1.43
Nkx3-1P97436 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm37372-201ENSMUST00000193577 3311 ntBASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm7690-201ENSMUST00000190885 1399 ntBASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm37530-201ENSMUST00000191759 4932 ntBASIC6.14□□□□□ -1.43
Nkx3-1P97436 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Nkx3-1P97436 CT025535.2-201ENSMUST00000228572 7441 ntBASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm45887-201ENSMUST00000212672 2998 ntBASIC6.14□□□□□ -1.43
Nkx3-1P97436 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Gm37283-201ENSMUST00000193111 1571 ntBASIC6.14□□□□□ -1.43
Nkx3-1P97436 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Nkx3-1P97436 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Nkx3-1P97436 AC159264.1-201ENSMUST00000224844 4257 ntBASIC6.13□□□□□ -1.43
Nkx3-1P97436 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms