Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Gm37977-201ENSMUST00000193096 721 ntBASIC5.92□□□□□ -1.46
Ufd1P70362 Ighv1-33-201ENSMUST00000193220 350 ntBASIC5.92□□□□□ -1.46
Ufd1P70362 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ufd1P70362 Gm43805-201ENSMUST00000198488 824 ntBASIC5.92□□□□□ -1.46
Ufd1P70362 Gm44725-201ENSMUST00000205307 391 ntTSL 5 BASIC5.92□□□□□ -1.46
Ufd1P70362 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ufd1P70362 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC5.92□□□□□ -1.46
Ufd1P70362 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC5.92□□□□□ -1.46
Ufd1P70362 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC5.92□□□□□ -1.46
Ufd1P70362 AC139568.1-201ENSMUST00000222878 486 ntBASIC5.92□□□□□ -1.46
Ufd1P70362 AC129537.1-202ENSMUST00000226619 430 ntBASIC5.92□□□□□ -1.46
Ufd1P70362 AC154528.3-201ENSMUST00000228011 679 ntBASIC5.92□□□□□ -1.46
Ufd1P70362 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ufd1P70362 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Ufd1P70362 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ufd1P70362 Gm5512-202ENSMUST00000220222 1522 ntBASIC5.92□□□□□ -1.46
Ufd1P70362 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ufd1P70362 Gm44141-201ENSMUST00000204231 1583 ntBASIC5.92□□□□□ -1.46
Ufd1P70362 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
Ufd1P70362 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ufd1P70362 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC5.92□□□□□ -1.46
Ufd1P70362 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ufd1P70362 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ufd1P70362 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ufd1P70362 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC5.92□□□□□ -1.46
Ufd1P70362 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.92□□□□□ -1.46
Ufd1P70362 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ufd1P70362 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ufd1P70362 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
Ufd1P70362 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ufd1P70362 Gm42613-201ENSMUST00000199975 1931 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 Gm45088-201ENSMUST00000207066 1408 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ufd1P70362 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ufd1P70362 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ufd1P70362 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ufd1P70362 Gm38147-201ENSMUST00000192397 1798 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Ufd1P70362 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Ufd1P70362 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC5.91□□□□□ -1.46
Ufd1P70362 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
Ufd1P70362 Gm22022-201ENSMUST00000104355 127 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ufd1P70362 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ufd1P70362 Gm14550-201ENSMUST00000117918 407 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 Gm15048-201ENSMUST00000118201 954 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 Gm11969-201ENSMUST00000118848 356 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 Gm13683-201ENSMUST00000119497 1076 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 Gm13940-201ENSMUST00000121023 301 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 Gm15187-201ENSMUST00000122329 264 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
Ufd1P70362 Gm2709-201ENSMUST00000142979 350 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC5.91□□□□□ -1.46
Ufd1P70362 Gm16116-201ENSMUST00000159472 430 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ufd1P70362 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ufd1P70362 Gm4252-201ENSMUST00000174823 313 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 Gm6061-201ENSMUST00000175860 492 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Ufd1P70362 Mir6912-201ENSMUST00000184456 70 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 Gm27595-201ENSMUST00000184579 112 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC5.91□□□□□ -1.46
Ufd1P70362 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ufd1P70362 Gm36982-201ENSMUST00000193796 1128 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 Gm37929-201ENSMUST00000195116 493 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 Gm6077-201ENSMUST00000196008 499 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 4930448I18Rik-201ENSMUST00000197958 736 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ufd1P70362 Gm43157-201ENSMUST00000198223 412 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC5.91□□□□□ -1.46
Ufd1P70362 4930557K07Rik-201ENSMUST00000205110 363 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ufd1P70362 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC5.91□□□□□ -1.46
Ufd1P70362 Gm33096-201ENSMUST00000210189 493 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 Gm45842-201ENSMUST00000211876 753 ntTSL 3 BASIC5.91□□□□□ -1.46
Ufd1P70362 Gm4780-201ENSMUST00000213206 1242 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 2310003N18Rik-201ENSMUST00000215655 458 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ufd1P70362 AC139941.1-201ENSMUST00000221517 478 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 AC130673.1-201ENSMUST00000227992 435 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 1700028K03Rik-201ENSMUST00000058921 797 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
Ufd1P70362 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ufd1P70362 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ufd1P70362 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
Ufd1P70362 Gm16410-201ENSMUST00000094550 774 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Ufd1P70362 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ufd1P70362 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Ufd1P70362 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ufd1P70362 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC5.91□□□□□ -1.46
Ufd1P70362 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ufd1P70362 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ufd1P70362 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ufd1P70362 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ufd1P70362 CT573019.1-201ENSMUST00000227762 1689 ntBASIC5.91□□□□□ -1.46
Ufd1P70362 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ufd1P70362 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Ufd1P70362 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ufd1P70362 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC5.91□□□□□ -1.46
Ufd1P70362 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Ufd1P70362 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Ufd1P70362 Gm14367-201ENSMUST00000119214 1497 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms