Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC7.92□□□□□ -1.14
Col2a1P28481 Mir7046-201ENSMUST00000183435 66 ntBASIC7.92□□□□□ -1.14
Col2a1P28481 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC7.92□□□□□ -1.14
Col2a1P28481 Gm29201-201ENSMUST00000189120 431 ntBASIC7.92□□□□□ -1.14
Col2a1P28481 Gm28620-201ENSMUST00000190463 439 ntBASIC7.92□□□□□ -1.14
Col2a1P28481 Gm44111-201ENSMUST00000204649 399 ntBASIC7.92□□□□□ -1.14
Col2a1P28481 Gm44823-201ENSMUST00000204775 1107 ntBASIC7.92□□□□□ -1.14
Col2a1P28481 Gm44911-201ENSMUST00000208436 1062 ntBASIC7.92□□□□□ -1.14
Col2a1P28481 Gm18040-201ENSMUST00000217922 827 ntBASIC7.92□□□□□ -1.14
Col2a1P28481 Gm7413-201ENSMUST00000219498 462 ntBASIC7.92□□□□□ -1.14
Col2a1P28481 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Col2a1P28481 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col2a1P28481 Mir425-201ENSMUST00000083645 85 ntBASIC7.92□□□□□ -1.14
Col2a1P28481 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Col2a1P28481 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC7.92□□□□□ -1.14
Col2a1P28481 Mars2-201ENSMUST00000061334 11294 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Col2a1P28481 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC7.92□□□□□ -1.14
Col2a1P28481 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col2a1P28481 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC7.92□□□□□ -1.14
Col2a1P28481 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Col2a1P28481 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col2a1P28481 Gm43221-201ENSMUST00000197612 2071 ntBASIC7.91□□□□□ -1.14
Col2a1P28481 Gm37924-201ENSMUST00000195470 3647 ntBASIC7.91□□□□□ -1.14
Col2a1P28481 Wdfy4-202ENSMUST00000130509 10158 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Col2a1P28481 Gm43029-201ENSMUST00000201829 1535 ntBASIC7.91□□□□□ -1.14
Col2a1P28481 Card6-201ENSMUST00000118365 5995 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Col2a1P28481 Vmn1r51-204ENSMUST00000226977 4357 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Col2a1P28481 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Col2a1P28481 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC7.91□□□□□ -1.14
Col2a1P28481 AC123738.2-201ENSMUST00000223791 1899 ntBASIC7.91□□□□□ -1.14
Col2a1P28481 AC153143.2-201ENSMUST00000220999 1804 ntBASIC7.91□□□□□ -1.14
Col2a1P28481 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC7.91□□□□□ -1.14
Col2a1P28481 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Col2a1P28481 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Col2a1P28481 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col2a1P28481 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC7.91□□□□□ -1.14
Col2a1P28481 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Col2a1P28481 Ep400-204ENSMUST00000112436 10685 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col2a1P28481 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Col2a1P28481 Gm12842-201ENSMUST00000117298 476 ntBASIC7.91□□□□□ -1.14
Col2a1P28481 Gm15750-201ENSMUST00000120970 616 ntBASIC7.91□□□□□ -1.14
Col2a1P28481 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC7.91□□□□□ -1.14
Col2a1P28481 Gm11609-201ENSMUST00000121926 793 ntBASIC7.91□□□□□ -1.14
Col2a1P28481 Gm22523-201ENSMUST00000158696 100 ntBASIC7.91□□□□□ -1.14
Col2a1P28481 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC7.91□□□□□ -1.14
Col2a1P28481 Gm29357-201ENSMUST00000186877 698 ntBASIC7.91□□□□□ -1.14
Col2a1P28481 Gm43867-201ENSMUST00000203860 525 ntBASIC7.91□□□□□ -1.14
Col2a1P28481 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC7.91□□□□□ -1.14
Col2a1P28481 Gm8607-201ENSMUST00000221864 431 ntBASIC7.91□□□□□ -1.14
Col2a1P28481 AC133203.1-201ENSMUST00000228241 301 ntBASIC7.91□□□□□ -1.14
Col2a1P28481 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Col2a1P28481 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC7.91□□□□□ -1.14
Col2a1P28481 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC7.91□□□□□ -1.14
Col2a1P28481 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col2a1P28481 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC7.91□□□□□ -1.14
Col2a1P28481 Gm43789-201ENSMUST00000199275 2472 ntBASIC7.91□□□□□ -1.14
Col2a1P28481 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Col2a1P28481 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col2a1P28481 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col2a1P28481 Slc38a2-201ENSMUST00000023099 4626 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col2a1P28481 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col2a1P28481 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col2a1P28481 Igf1r-201ENSMUST00000005671 11409 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col2a1P28481 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col2a1P28481 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col2a1P28481 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col2a1P28481 Gm9575-201ENSMUST00000122140 1339 ntBASIC7.9□□□□□ -1.14
Col2a1P28481 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Col2a1P28481 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Col2a1P28481 Gm15413-201ENSMUST00000155101 1935 ntTSL 2 BASIC7.9□□□□□ -1.14
Col2a1P28481 Gm6786-201ENSMUST00000203165 1915 ntBASIC7.9□□□□□ -1.14
Col2a1P28481 Mir680-1-201ENSMUST00000102257 109 ntBASIC7.9□□□□□ -1.14
Col2a1P28481 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Col2a1P28481 Gm23748-201ENSMUST00000104227 131 ntBASIC7.9□□□□□ -1.14
Col2a1P28481 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC7.9□□□□□ -1.14
Col2a1P28481 Gm5793-201ENSMUST00000119393 630 ntBASIC7.9□□□□□ -1.14
Col2a1P28481 Gm23426-201ENSMUST00000122483 318 ntBASIC7.9□□□□□ -1.14
Col2a1P28481 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Col2a1P28481 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Col2a1P28481 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Col2a1P28481 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC7.9□□□□□ -1.14
Col2a1P28481 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC7.9□□□□□ -1.14
Col2a1P28481 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC7.9□□□□□ -1.14
Col2a1P28481 Gm1969-201ENSMUST00000198125 1220 ntBASIC7.9□□□□□ -1.14
Col2a1P28481 Gm44374-201ENSMUST00000199821 140 ntBASIC7.9□□□□□ -1.14
Col2a1P28481 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC7.9□□□□□ -1.14
Col2a1P28481 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC7.9□□□□□ -1.14
Col2a1P28481 Gm45626-201ENSMUST00000210093 361 ntBASIC7.9□□□□□ -1.14
Col2a1P28481 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC7.9□□□□□ -1.14
Col2a1P28481 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC7.9□□□□□ -1.14
Col2a1P28481 AC124601.1-201ENSMUST00000220531 135 ntBASIC7.9□□□□□ -1.14
Col2a1P28481 Gm18620-201ENSMUST00000222295 324 ntBASIC7.9□□□□□ -1.14
Col2a1P28481 AC154573.2-201ENSMUST00000224174 378 ntBASIC7.9□□□□□ -1.14
Col2a1P28481 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC7.9□□□□□ -1.14
Col2a1P28481 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col2a1P28481 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Col2a1P28481 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Col2a1P28481 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col2a1P28481 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Col2a1P28481 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms