Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm15216-201ENSMUST00000118058 277 ntBASIC9.05□□□□□ -0.96
Hoxc9P09633 Gm15181-201ENSMUST00000120142 177 ntBASIC9.05□□□□□ -0.96
Hoxc9P09633 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC9.05□□□□□ -0.96
Hoxc9P09633 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC9.05□□□□□ -0.96
Hoxc9P09633 Gm5456-201ENSMUST00000170706 844 ntBASIC9.05□□□□□ -0.96
Hoxc9P09633 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC9.05□□□□□ -0.96
Hoxc9P09633 Gm17045-201ENSMUST00000178600 844 ntBASIC9.05□□□□□ -0.96
Hoxc9P09633 Gm27299-201ENSMUST00000184593 103 ntBASIC9.05□□□□□ -0.96
Hoxc9P09633 Gm19185-201ENSMUST00000196365 643 ntBASIC9.05□□□□□ -0.96
Hoxc9P09633 Gm43725-201ENSMUST00000200122 369 ntBASIC9.05□□□□□ -0.96
Hoxc9P09633 Gm44163-201ENSMUST00000205140 475 ntBASIC9.05□□□□□ -0.96
Hoxc9P09633 Gm32983-201ENSMUST00000208500 505 ntBASIC9.05□□□□□ -0.96
Hoxc9P09633 Gm7769-201ENSMUST00000212900 933 ntBASIC9.05□□□□□ -0.96
Hoxc9P09633 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC9.05□□□□□ -0.96
Hoxc9P09633 AC158750.1-201ENSMUST00000226163 634 ntBASIC9.05□□□□□ -0.96
Hoxc9P09633 Gm24032-201ENSMUST00000083932 159 ntBASIC9.05□□□□□ -0.96
Hoxc9P09633 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxc9P09633 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC9.05□□□□□ -0.96
Hoxc9P09633 AC122356.1-202ENSMUST00000227328 2758 ntBASIC9.05□□□□□ -0.96
Hoxc9P09633 Gm38043-201ENSMUST00000195501 5141 ntBASIC9.05□□□□□ -0.96
Hoxc9P09633 Rdh16-201ENSMUST00000071646 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxc9P09633 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxc9P09633 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hoxc9P09633 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hoxc9P09633 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Hoxc9P09633 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Hoxc9P09633 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hoxc9P09633 Helz2-202ENSMUST00000108831 10109 ntAPPRIS P2 TSL 5 BASIC9.04□□□□□ -0.96
Hoxc9P09633 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hoxc9P09633 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Hoxc9P09633 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hoxc9P09633 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hoxc9P09633 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC9.04□□□□□ -0.96
Hoxc9P09633 Gm9506-201ENSMUST00000118516 320 ntBASIC9.04□□□□□ -0.96
Hoxc9P09633 Gm5793-201ENSMUST00000119393 630 ntBASIC9.04□□□□□ -0.96
Hoxc9P09633 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC9.04□□□□□ -0.96
Hoxc9P09633 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC9.04□□□□□ -0.96
Hoxc9P09633 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Hoxc9P09633 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Hoxc9P09633 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC9.04□□□□□ -0.96
Hoxc9P09633 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC9.04□□□□□ -0.96
Hoxc9P09633 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hoxc9P09633 Gm21392-201ENSMUST00000182950 972 ntBASIC9.04□□□□□ -0.96
Hoxc9P09633 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC9.04□□□□□ -0.96
Hoxc9P09633 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hoxc9P09633 Gm44487-201ENSMUST00000205145 325 ntBASIC9.04□□□□□ -0.96
Hoxc9P09633 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC9.04□□□□□ -0.96
Hoxc9P09633 Gm45899-201ENSMUST00000212196 1276 ntBASIC9.04□□□□□ -0.96
Hoxc9P09633 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC9.04□□□□□ -0.96
Hoxc9P09633 Gm46203-201ENSMUST00000218130 478 ntBASIC9.04□□□□□ -0.96
Hoxc9P09633 CT025579.4-201ENSMUST00000224598 627 ntBASIC9.04□□□□□ -0.96
Hoxc9P09633 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Hoxc9P09633 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hoxc9P09633 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hoxc9P09633 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hoxc9P09633 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Hoxc9P09633 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
Hoxc9P09633 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hoxc9P09633 Gm44669-201ENSMUST00000207774 1969 ntBASIC9.04□□□□□ -0.96
Hoxc9P09633 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hoxc9P09633 Snhg17-209ENSMUST00000186993 3144 ntBASIC9.04□□□□□ -0.96
Hoxc9P09633 Gm43410-201ENSMUST00000197510 2234 ntBASIC9.04□□□□□ -0.96
Hoxc9P09633 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hoxc9P09633 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Hoxc9P09633 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Hoxc9P09633 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC9.03□□□□□ -0.96
Hoxc9P09633 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Hoxc9P09633 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Hoxc9P09633 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hoxc9P09633 Gm10744-201ENSMUST00000220184 2706 ntBASIC9.03□□□□□ -0.96
Hoxc9P09633 Gm22374-201ENSMUST00000104583 132 ntBASIC9.03□□□□□ -0.96
Hoxc9P09633 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC9.03□□□□□ -0.96
Hoxc9P09633 Gm11462-201ENSMUST00000117749 562 ntBASIC9.03□□□□□ -0.96
Hoxc9P09633 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC9.03□□□□□ -0.96
Hoxc9P09633 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Hoxc9P09633 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC9.03□□□□□ -0.96
Hoxc9P09633 Gm17217-201ENSMUST00000166613 469 ntBASIC9.03□□□□□ -0.96
Hoxc9P09633 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC9.03□□□□□ -0.96
Hoxc9P09633 Gm27601-201ENSMUST00000184794 127 ntBASIC9.03□□□□□ -0.96
Hoxc9P09633 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC9.03□□□□□ -0.96
Hoxc9P09633 Gm43748-201ENSMUST00000202329 1233 ntBASIC9.03□□□□□ -0.96
Hoxc9P09633 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC9.03□□□□□ -0.96
Hoxc9P09633 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC9.03□□□□□ -0.96
Hoxc9P09633 AL713985.1-201ENSMUST00000219030 420 ntBASIC9.03□□□□□ -0.96
Hoxc9P09633 AC134917.2-201ENSMUST00000223354 124 ntBASIC9.03□□□□□ -0.96
Hoxc9P09633 AC132833.4-201ENSMUST00000228313 203 ntBASIC9.03□□□□□ -0.96
Hoxc9P09633 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC9.03□□□□□ -0.96
Hoxc9P09633 Vmn1r51-204ENSMUST00000226977 4357 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Hoxc9P09633 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hoxc9P09633 Gm15413-201ENSMUST00000155101 1935 ntTSL 2 BASIC9.03□□□□□ -0.96
Hoxc9P09633 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hoxc9P09633 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hoxc9P09633 Gm14615-201ENSMUST00000117575 1816 ntBASIC9.03□□□□□ -0.96
Hoxc9P09633 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Hoxc9P09633 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hoxc9P09633 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hoxc9P09633 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Hoxc9P09633 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC9.02□□□□□ -0.96
Hoxc9P09633 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
Hoxc9P09633 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 578.2 ms