Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
B020004C17RikJ3QP07 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
B020004C17RikJ3QP07 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
B020004C17RikJ3QP07 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC8.07□□□□□ -1.12
B020004C17RikJ3QP07 Gm6493-201ENSMUST00000159889 1786 ntBASIC8.07□□□□□ -1.12
B020004C17RikJ3QP07 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
B020004C17RikJ3QP07 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
B020004C17RikJ3QP07 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
B020004C17RikJ3QP07 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
B020004C17RikJ3QP07 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Gm43961-201ENSMUST00000203289 1872 ntBASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Gm42668-201ENSMUST00000200747 2487 ntBASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Gm26340-201ENSMUST00000102365 99 ntBASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Gm14070-201ENSMUST00000120773 428 ntBASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Gm22275-201ENSMUST00000122470 310 ntBASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Gm16276-201ENSMUST00000131218 262 ntBASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Gm24286-201ENSMUST00000157632 128 ntBASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Mir5617-201ENSMUST00000176786 57 ntBASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Gm4373-201ENSMUST00000178571 556 ntBASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Gm10410-201ENSMUST00000180138 384 ntBASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Gm26898-201ENSMUST00000181678 384 ntBASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Gm37637-201ENSMUST00000195540 1256 ntBASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Gm44162-201ENSMUST00000203543 544 ntBASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Thoc7-209ENSMUST00000225325 765 ntBASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 AC164436.1-201ENSMUST00000227074 772 ntBASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 AC121997.2-202ENSMUST00000227158 939 ntBASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Gm42679-201ENSMUST00000197086 2906 ntBASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC8.06□□□□□ -1.12
B020004C17RikJ3QP07 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 AC164567.3-201ENSMUST00000217743 2869 ntBASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 AC162301.1-201ENSMUST00000228785 1542 ntBASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 Gm22024-201ENSMUST00000122733 287 ntBASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 Gm20454-201ENSMUST00000172713 221 ntBASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 Gm28958-201ENSMUST00000185864 703 ntBASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 Gm17895-201ENSMUST00000194028 874 ntBASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 Gm18012-201ENSMUST00000204558 773 ntBASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 Gm44565-201ENSMUST00000208194 269 ntBASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 Gm18469-201ENSMUST00000208850 439 ntBASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC8.05□□□□□ -1.12
B020004C17RikJ3QP07 AC164295.1-201ENSMUST00000224861 186 ntBASIC8.05□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms