Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Cntnap4-202ENSMUST00000118171 4860 ntAPPRIS ALT1 TSL 5 BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Herc3-202ENSMUST00000041401 4731 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Gm14615-201ENSMUST00000117575 1816 ntBASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Inpp5d-210ENSMUST00000169754 4937 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Gm5319-201ENSMUST00000118965 873 ntBASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Gm14202-201ENSMUST00000120121 311 ntBASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC7.16□□□□□ -1.26
Col4a6B1AVK5 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Gm27005-201ENSMUST00000182783 921 ntBASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Mir6348-201ENSMUST00000183804 120 ntBASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Gm18700-201ENSMUST00000185791 553 ntBASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Gm7270-201ENSMUST00000195818 1128 ntBASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Gm18600-201ENSMUST00000207205 505 ntBASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 AC156016.2-201ENSMUST00000228200 525 ntBASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Gm25587-201ENSMUST00000082498 166 ntBASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Slc2a9-203ENSMUST00000067886 3602 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Gm12608-201ENSMUST00000122013 1715 ntBASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Gm4806-201ENSMUST00000222704 1690 ntBASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Smpd4-203ENSMUST00000090159 4565 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Gm45297-201ENSMUST00000209893 3483 ntBASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Gm11256-201ENSMUST00000118109 829 ntBASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Gm14613-201ENSMUST00000122239 752 ntBASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Gm23896-201ENSMUST00000158109 130 ntBASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Gm27152-201ENSMUST00000183828 99 ntBASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Gm28620-201ENSMUST00000190463 439 ntBASIC7.16□□□□□ -1.26
Col4a6B1AVK5 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Gm5708-201ENSMUST00000196289 886 ntBASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Gm18586-201ENSMUST00000217265 518 ntBASIC7.16□□□□□ -1.26
Col4a6B1AVK5 AC161252.1-201ENSMUST00000225536 467 ntBASIC7.16□□□□□ -1.26
Col4a6B1AVK5 AC154795.1-201ENSMUST00000225611 364 ntBASIC7.16□□□□□ -1.26
Col4a6B1AVK5 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Gm26442-201ENSMUST00000082588 153 ntBASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col4a6B1AVK5 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Col4a6B1AVK5 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col4a6B1AVK5 Frmd4a-219ENSMUST00000177457 6538 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Col4a6B1AVK5 Amy2b-201ENSMUST00000120184 1577 ntBASIC7.15□□□□□ -1.26
Col4a6B1AVK5 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Col4a6B1AVK5 AC115746.1-201ENSMUST00000228949 3617 ntBASIC7.15□□□□□ -1.26
Col4a6B1AVK5 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Col4a6B1AVK5 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col4a6B1AVK5 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Col4a6B1AVK5 AC121286.2-201ENSMUST00000218069 2470 ntBASIC7.15□□□□□ -1.26
Col4a6B1AVK5 Olfr63-203ENSMUST00000217023 7023 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Col4a6B1AVK5 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.26
Col4a6B1AVK5 Gm37138-201ENSMUST00000194564 2089 ntBASIC7.15□□□□□ -1.26
Col4a6B1AVK5 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col4a6B1AVK5 Cacna1f-202ENSMUST00000115726 6079 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col4a6B1AVK5 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.26
Col4a6B1AVK5 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col4a6B1AVK5 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Col4a6B1AVK5 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Col4a6B1AVK5 Gm18716-201ENSMUST00000204507 1603 ntBASIC7.15□□□□□ -1.26
Col4a6B1AVK5 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Col4a6B1AVK5 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Col4a6B1AVK5 Plec-217ENSMUST00000169438 14827 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Col4a6B1AVK5 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Col4a6B1AVK5 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Col4a6B1AVK5 Gm14614-201ENSMUST00000119873 384 ntBASIC7.15□□□□□ -1.27
Col4a6B1AVK5 Mup-ps16-201ENSMUST00000120085 596 ntBASIC7.15□□□□□ -1.27
Col4a6B1AVK5 Gm15502-201ENSMUST00000121449 208 ntBASIC7.15□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms