Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Mir8120-201ENSMUST00000185035 139 ntBASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Gm8168-201ENSMUST00000209631 948 ntBASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Gm18907-201ENSMUST00000209719 932 ntBASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Gm7368-201ENSMUST00000213307 367 ntBASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Gm22053-201ENSMUST00000083394 200 ntBASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 AC153152.1-201ENSMUST00000221105 2742 ntBASIC6.71□□□□□ -1.33
Upk3aQ9JKX8 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Upk3aQ9JKX8 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Upk3aQ9JKX8 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Upk3aQ9JKX8 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Upk3aQ9JKX8 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Upk3aQ9JKX8 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Upk3aQ9JKX8 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Upk3aQ9JKX8 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.33
Upk3aQ9JKX8 Gm36930-201ENSMUST00000195431 2376 ntBASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Gm6181-201ENSMUST00000117187 264 ntBASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Gm14865-201ENSMUST00000117523 494 ntBASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Gm15158-201ENSMUST00000120577 570 ntBASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Gm13237-201ENSMUST00000122151 635 ntBASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Gm23891-201ENSMUST00000158114 138 ntBASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Gm9167-201ENSMUST00000182469 962 ntBASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Mir7005-201ENSMUST00000185089 69 ntBASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Gm29470-201ENSMUST00000188007 696 ntBASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Gm42883-201ENSMUST00000202594 222 ntBASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Gm5723-201ENSMUST00000203096 432 ntBASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 AC150661.1-201ENSMUST00000222563 495 ntBASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 AC163684.1-201ENSMUST00000223766 927 ntBASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 AC115304.1-202ENSMUST00000226850 837 ntBASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Mir138-2-201ENSMUST00000083578 71 ntBASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Upk3aQ9JKX8 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Gm11889-201ENSMUST00000118402 1079 ntBASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Gm13930-201ENSMUST00000118569 368 ntBASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Gm15153-201ENSMUST00000119867 274 ntBASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Gm6451-201ENSMUST00000121488 717 ntBASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Gm25722-201ENSMUST00000157498 279 ntBASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Gm24680-201ENSMUST00000158759 126 ntBASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Gm21301-201ENSMUST00000189476 699 ntBASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 Gm29496-201ENSMUST00000189854 693 ntBASIC6.7□□□□□ -1.34
Upk3aQ9JKX8 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms