Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cdh23Q99PF4 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cdh23Q99PF4 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cdh23Q99PF4 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cdh23Q99PF4 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cdh23Q99PF4 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Cdh23Q99PF4 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Cdh23Q99PF4 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cdh23Q99PF4 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.84□□□□□ -1.31
Cdh23Q99PF4 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Cdh23Q99PF4 Gm11481-201ENSMUST00000120069 255 ntBASIC6.84□□□□□ -1.31
Cdh23Q99PF4 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Cdh23Q99PF4 Gm6808-201ENSMUST00000162341 807 ntBASIC6.84□□□□□ -1.31
Cdh23Q99PF4 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Cdh23Q99PF4 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Cdh23Q99PF4 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Cdh23Q99PF4 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Cdh23Q99PF4 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Cdh23Q99PF4 Mir6963-201ENSMUST00000183535 71 ntBASIC6.84□□□□□ -1.31
Cdh23Q99PF4 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC6.84□□□□□ -1.31
Cdh23Q99PF4 Gm18850-201ENSMUST00000211578 388 ntBASIC6.84□□□□□ -1.31
Cdh23Q99PF4 AC132587.1-201ENSMUST00000220562 166 ntBASIC6.84□□□□□ -1.31
Cdh23Q99PF4 AC154646.1-201ENSMUST00000225011 1092 ntBASIC6.84□□□□□ -1.31
Cdh23Q99PF4 AC170810.1-201ENSMUST00000228267 672 ntBASIC6.84□□□□□ -1.31
Cdh23Q99PF4 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cdh23Q99PF4 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cdh23Q99PF4 Myt1l-205ENSMUST00000218583 4522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cdh23Q99PF4 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cdh23Q99PF4 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
Cdh23Q99PF4 Gm44916-201ENSMUST00000208664 2194 ntBASIC6.84□□□□□ -1.32
Cdh23Q99PF4 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Cdh23Q99PF4 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Cdh23Q99PF4 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Cdh23Q99PF4 Zfp275-202ENSMUST00000114499 6284 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
Cdh23Q99PF4 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Gm37410-201ENSMUST00000193623 3039 ntBASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Gm23546-201ENSMUST00000158211 137 ntBASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Pcyt1a-201ENSMUST00000079791 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Stat1-206ENSMUST00000186857 4241 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Gm28758-201ENSMUST00000186123 2167 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Gm25917-201ENSMUST00000104267 130 ntBASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Gm12685-201ENSMUST00000121702 214 ntBASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Mir7006-201ENSMUST00000183624 69 ntBASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Gm43631-201ENSMUST00000202011 369 ntBASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Gm36501-201ENSMUST00000221857 745 ntBASIC6.83□□□□□ -1.32
Cdh23Q99PF4 AC163684.1-201ENSMUST00000223766 927 ntBASIC6.83□□□□□ -1.32
Cdh23Q99PF4 AC113198.1-201ENSMUST00000226353 832 ntBASIC6.83□□□□□ -1.32
Cdh23Q99PF4 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Gm37738-201ENSMUST00000192396 4716 ntBASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Gm7713-201ENSMUST00000181201 1007 ntBASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Gm29454-201ENSMUST00000190805 393 ntBASIC6.83□□□□□ -1.32
Cdh23Q99PF4 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Gm40598-201ENSMUST00000222953 547 ntBASIC6.83□□□□□ -1.32
Cdh23Q99PF4 AC122858.1-202ENSMUST00000228290 986 ntBASIC6.83□□□□□ -1.32
Cdh23Q99PF4 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Cdh23Q99PF4 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Cdh23Q99PF4 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Cdh23Q99PF4 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC6.82□□□□□ -1.32
Cdh23Q99PF4 AC156025.3-201ENSMUST00000225919 3095 ntBASIC6.82□□□□□ -1.32
Cdh23Q99PF4 Gm29670-201ENSMUST00000190228 2491 ntBASIC6.82□□□□□ -1.32
Cdh23Q99PF4 Gm37783-201ENSMUST00000192025 1856 ntBASIC6.82□□□□□ -1.32
Cdh23Q99PF4 Gm45182-201ENSMUST00000207579 2404 ntBASIC6.82□□□□□ -1.32
Cdh23Q99PF4 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Cdh23Q99PF4 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Cdh23Q99PF4 AC138284.5-201ENSMUST00000214389 652 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms