Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC8.21□□□□□ -1.09
Clp1Q99LI9 Cd200r4-201ENSMUST00000114626 1700 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Clp1Q99LI9 Gm8878-201ENSMUST00000173552 1725 ntBASIC8.21□□□□□ -1.09
Clp1Q99LI9 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
Clp1Q99LI9 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Clp1Q99LI9 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Clp1Q99LI9 Oprl1-201ENSMUST00000071585 2999 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
Clp1Q99LI9 Glod4-206ENSMUST00000169701 4203 ntTSL 2 BASIC8.21□□□□□ -1.09
Clp1Q99LI9 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gm15739-201ENSMUST00000118049 872 ntBASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gm12444-201ENSMUST00000121512 877 ntBASIC8.21□□□□□ -1.1
Clp1Q99LI9 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Clp1Q99LI9 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Clp1Q99LI9 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Pea15b-201ENSMUST00000182806 387 ntBASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gm27373-201ENSMUST00000184017 184 ntBASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gm28580-201ENSMUST00000186767 88 ntBASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gm28980-201ENSMUST00000187877 219 ntBASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gm29383-201ENSMUST00000188284 480 ntBASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gm36638-201ENSMUST00000193295 400 ntBASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gm37225-201ENSMUST00000193423 325 ntBASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC8.21□□□□□ -1.1
Clp1Q99LI9 Igkv4-77-201ENSMUST00000199410 352 ntBASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gm45734-201ENSMUST00000211916 411 ntBASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gm7769-201ENSMUST00000212900 933 ntBASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gm45725-201ENSMUST00000212962 337 ntBASIC8.21□□□□□ -1.1
Clp1Q99LI9 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC8.21□□□□□ -1.1
Clp1Q99LI9 AC155941.3-201ENSMUST00000218476 308 ntBASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gm32300-201ENSMUST00000221735 515 ntBASIC8.21□□□□□ -1.1
Clp1Q99LI9 AC079644.3-201ENSMUST00000222452 357 ntBASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Clp1Q99LI9 AC153153.2-201ENSMUST00000223572 411 ntBASIC8.21□□□□□ -1.1
Clp1Q99LI9 AC157654.1-201ENSMUST00000224130 820 ntBASIC8.21□□□□□ -1.1
Clp1Q99LI9 AC114916.1-201ENSMUST00000228465 494 ntBASIC8.21□□□□□ -1.1
Clp1Q99LI9 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC8.21□□□□□ -1.1
Clp1Q99LI9 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Msh4-205ENSMUST00000190449 3110 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Clp1Q99LI9 D7Ertd443e-201ENSMUST00000094002 2908 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Csf3r-202ENSMUST00000106162 3481 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Gm38300-201ENSMUST00000194245 1870 ntBASIC8.21□□□□□ -1.1
Clp1Q99LI9 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC8.21□□□□□ -1.1
Clp1Q99LI9 AC163342.1-201ENSMUST00000216533 2718 ntTSL 5 BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Wdpcp-201ENSMUST00000020568 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Ranbp9-208ENSMUST00000222651 1951 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Clp1Q99LI9 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Gm13058-201ENSMUST00000117097 1435 ntBASIC8.2□□□□□ -1.1
Clp1Q99LI9 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Itgam-205ENSMUST00000120355 3701 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Clp1Q99LI9 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Stmn2-201ENSMUST00000029002 2073 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Clp1Q99LI9 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Zscan26-201ENSMUST00000032820 3918 ntTSL 3 BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Dennd6a-205ENSMUST00000224378 2424 ntBASIC8.2□□□□□ -1.1
Clp1Q99LI9 Rars-201ENSMUST00000018992 2109 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Gm6982-201ENSMUST00000118752 1560 ntBASIC8.2□□□□□ -1.1
Clp1Q99LI9 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Gm18560-201ENSMUST00000173463 1123 ntBASIC8.2□□□□□ -1.1
Clp1Q99LI9 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC8.2□□□□□ -1.1
Clp1Q99LI9 Gm24925-201ENSMUST00000178157 107 ntBASIC8.2□□□□□ -1.1
Clp1Q99LI9 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Clp1Q99LI9 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Gm7481-201ENSMUST00000182020 995 ntBASIC8.2□□□□□ -1.1
Clp1Q99LI9 Gm26915-201ENSMUST00000183080 748 ntBASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms