Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm13038-201ENSMUST00000119886 459 ntBASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Gm22949-201ENSMUST00000158562 105 ntBASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Gm7031-201ENSMUST00000173709 919 ntBASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Gm21181-201ENSMUST00000186249 330 ntBASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Gm6077-201ENSMUST00000196008 499 ntBASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Gm32102-201ENSMUST00000196885 241 ntBASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Gm43905-201ENSMUST00000204516 204 ntBASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Gm6290-201ENSMUST00000207666 1158 ntBASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 AC155934.1-201ENSMUST00000213802 322 ntTSL 5 BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 AC238940.2-201ENSMUST00000224202 330 ntBASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ccdc28bQ8CEG5 Gm21781-201ENSMUST00000178920 4838 ntBASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Gm26569-201ENSMUST00000181968 1789 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Gm23062-201ENSMUST00000102349 110 ntBASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Gm13929-201ENSMUST00000117553 1125 ntBASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Gm12094-201ENSMUST00000121781 472 ntBASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Gm10913-201ENSMUST00000133732 463 ntBASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Gm14339-201ENSMUST00000146224 423 ntTSL 2 BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Gm8305-201ENSMUST00000180022 1195 ntBASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Gm8192-201ENSMUST00000182196 958 ntBASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Gm20587-201ENSMUST00000186367 1186 ntBASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Gm28728-201ENSMUST00000189087 405 ntBASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Pisrt1-201ENSMUST00000195532 515 ntBASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Gm44451-201ENSMUST00000203767 483 ntBASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Gm39059-201ENSMUST00000209160 424 ntTSL 5 BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Gm45693-201ENSMUST00000211391 1157 ntBASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Olfr863-ps1-201ENSMUST00000213073 929 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 CT571271.1-201ENSMUST00000227071 670 ntBASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Ube2e2-201ENSMUST00000076133 606 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28bQ8CEG5 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Ccdc28bQ8CEG5 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Ccdc28bQ8CEG5 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Ccdc28bQ8CEG5 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Ccdc28bQ8CEG5 Glcci1-202ENSMUST00000161217 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Ccdc28bQ8CEG5 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
Ccdc28bQ8CEG5 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
Ccdc28bQ8CEG5 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6.9□□□□□ -1.31
Ccdc28bQ8CEG5 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC6.9□□□□□ -1.31
Ccdc28bQ8CEG5 Gm10773-201ENSMUST00000218071 3935 ntBASIC6.9□□□□□ -1.31
Ccdc28bQ8CEG5 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Ccdc28bQ8CEG5 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.9□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 104 ms