Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Gm29761-201ENSMUST00000215964 1939 ntBASIC8.31□□□□□ -1.08
Vps53Q8CCB4 AC159195.2-201ENSMUST00000223670 3757 ntBASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Vps53Q8CCB4 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Gm6866-201ENSMUST00000188559 2549 ntBASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 AC091783.1-201ENSMUST00000223614 1613 ntBASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Gm11928-201ENSMUST00000119323 437 ntBASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Gm14603-201ENSMUST00000121275 448 ntBASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Gm13282-201ENSMUST00000121577 545 ntBASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Gm22795-201ENSMUST00000157233 118 ntBASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Gm27684-201ENSMUST00000183778 80 ntBASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Gm35108-201ENSMUST00000194321 699 ntBASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Gm33191-201ENSMUST00000195604 699 ntBASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Gm45100-201ENSMUST00000209153 391 ntBASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Gm45733-201ENSMUST00000212988 437 ntBASIC8.3□□□□□ -1.08
Vps53Q8CCB4 AC174678.3-201ENSMUST00000227568 362 ntBASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Gm42772-201ENSMUST00000199945 3041 ntBASIC8.3□□□□□ -1.08
Vps53Q8CCB4 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Vps53Q8CCB4 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Snhg17-209ENSMUST00000186993 3144 ntBASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Gm45221-201ENSMUST00000207822 2272 ntBASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Gm44021-201ENSMUST00000203055 3516 ntBASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Gm28583-201ENSMUST00000188903 2141 ntBASIC8.29□□□□□ -1.08
Vps53Q8CCB4 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 AC122263.1-201ENSMUST00000228636 2805 ntBASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 n-R5s72-201ENSMUST00000104518 119 ntBASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Gm12104-201ENSMUST00000120359 979 ntBASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Gm14489-201ENSMUST00000120868 901 ntBASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Gm26729-201ENSMUST00000180744 352 ntBASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Gm18501-201ENSMUST00000185363 664 ntBASIC8.29□□□□□ -1.08
Vps53Q8CCB4 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Gm37295-201ENSMUST00000192186 109 ntBASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Gm38177-201ENSMUST00000192213 1040 ntBASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Gm38079-201ENSMUST00000195603 154 ntBASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Gm43037-201ENSMUST00000196808 250 ntBASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 AC160114.2-201ENSMUST00000223021 300 ntBASIC8.29□□□□□ -1.08
Vps53Q8CCB4 AC115304.1-202ENSMUST00000226850 837 ntBASIC8.29□□□□□ -1.08
Vps53Q8CCB4 n-R5s41-201ENSMUST00000083025 119 ntBASIC8.29□□□□□ -1.08
Vps53Q8CCB4 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Gm38262-201ENSMUST00000194760 1382 ntBASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Vps53Q8CCB4 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms