Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 1810014B01Rik-205ENSMUST00000218691 323 ntTSL 3 BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 AC161247.1-201ENSMUST00000217744 2295 ntBASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Gm37138-201ENSMUST00000194564 2089 ntBASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 CT009757.4-201ENSMUST00000221520 2541 ntBASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Gm11271-201ENSMUST00000116054 440 ntBASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Gm27653-201ENSMUST00000185037 136 ntBASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Gm28952-201ENSMUST00000189285 681 ntBASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 AC102139.1-201ENSMUST00000227000 251 ntBASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Gm18716-201ENSMUST00000204507 1603 ntBASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Gm37956-201ENSMUST00000195208 2010 ntBASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Gm14018-201ENSMUST00000119042 455 ntBASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Gm7266-201ENSMUST00000187999 405 ntBASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Gm43905-201ENSMUST00000204516 204 ntBASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Gm7769-201ENSMUST00000212900 933 ntBASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Gm19324-201ENSMUST00000213229 1169 ntBASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Gm9118-201ENSMUST00000219246 754 ntBASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 AC121286.2-201ENSMUST00000218069 2470 ntBASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Gm15681-201ENSMUST00000137501 2704 ntBASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 AC154597.1-201ENSMUST00000224095 2713 ntBASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Gm8107-201ENSMUST00000117477 2009 ntBASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col6a6Q8C6K9 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col6a6Q8C6K9 Gm37150-201ENSMUST00000193900 2754 ntBASIC6.34□□□□□ -1.39
Col6a6Q8C6K9 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Col6a6Q8C6K9 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col6a6Q8C6K9 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col6a6Q8C6K9 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Col6a6Q8C6K9 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col6a6Q8C6K9 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.34□□□□□ -1.39
Col6a6Q8C6K9 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC6.34□□□□□ -1.39
Col6a6Q8C6K9 Gm44565-201ENSMUST00000208194 269 ntBASIC6.34□□□□□ -1.39
Col6a6Q8C6K9 Gm18040-201ENSMUST00000217922 827 ntBASIC6.34□□□□□ -1.39
Col6a6Q8C6K9 AC164436.1-201ENSMUST00000227074 772 ntBASIC6.34□□□□□ -1.39
Col6a6Q8C6K9 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col6a6Q8C6K9 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col6a6Q8C6K9 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
Col6a6Q8C6K9 Gm38315-201ENSMUST00000194286 2437 ntBASIC6.34□□□□□ -1.39
Col6a6Q8C6K9 Wfdc5-201ENSMUST00000045127 2322 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col6a6Q8C6K9 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col6a6Q8C6K9 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col6a6Q8C6K9 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col6a6Q8C6K9 Slc16a7-201ENSMUST00000063318 2419 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col6a6Q8C6K9 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Col6a6Q8C6K9 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col6a6Q8C6K9 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Col6a6Q8C6K9 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col6a6Q8C6K9 Fam135b-201ENSMUST00000022953 4623 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Col6a6Q8C6K9 Snord88a-201ENSMUST00000116723 90 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms