Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Usp40Q8BWR4 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Gm42479-201ENSMUST00000198654 1356 ntBASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Mir760-201ENSMUST00000103257 119 ntBASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Gm12653-201ENSMUST00000117778 561 ntBASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Gm11370-201ENSMUST00000120583 260 ntBASIC9.68□□□□□ -0.86
Usp40Q8BWR4 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Gm3326-201ENSMUST00000164656 1043 ntBASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Gm8581-201ENSMUST00000188636 890 ntBASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Gm36965-201ENSMUST00000193797 394 ntBASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Gm5708-201ENSMUST00000196289 886 ntBASIC9.68□□□□□ -0.86
Usp40Q8BWR4 AC099760.1-201ENSMUST00000196300 153 ntBASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Gm43141-201ENSMUST00000199695 274 ntBASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Gm2774-201ENSMUST00000213650 1165 ntBASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC9.68□□□□□ -0.86
Usp40Q8BWR4 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usp40Q8BWR4 AC156025.3-201ENSMUST00000225919 3095 ntBASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC9.68□□□□□ -0.86
Usp40Q8BWR4 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Usp40Q8BWR4 AC162301.1-201ENSMUST00000228785 1542 ntBASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Gm5361-201ENSMUST00000211041 1498 ntBASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Usp40Q8BWR4 AC122356.1-202ENSMUST00000227328 2758 ntBASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Gm12187-201ENSMUST00000119584 1375 ntBASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Gm12939-201ENSMUST00000117303 165 ntBASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Gm8722-201ENSMUST00000121466 769 ntBASIC9.67□□□□□ -0.86
Usp40Q8BWR4 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC9.67□□□□□ -0.86
Usp40Q8BWR4 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Gm4956-202ENSMUST00000178869 672 ntBASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Gm21301-201ENSMUST00000189476 699 ntBASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Gm37857-201ENSMUST00000191784 1199 ntBASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Gm37328-201ENSMUST00000193191 640 ntBASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC9.67□□□□□ -0.86
Usp40Q8BWR4 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Gm37138-201ENSMUST00000194564 2089 ntBASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Gm43221-201ENSMUST00000197612 2071 ntBASIC9.67□□□□□ -0.86
Usp40Q8BWR4 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 CT010470.1-201ENSMUST00000225364 1876 ntBASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Gm43497-201ENSMUST00000201137 2316 ntBASIC9.66□□□□□ -0.86
Usp40Q8BWR4 AC154597.1-201ENSMUST00000224095 2713 ntBASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Gm25724-201ENSMUST00000104531 117 ntBASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Gm6654-201ENSMUST00000118950 348 ntBASIC9.66□□□□□ -0.86
Usp40Q8BWR4 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Gm18808-201ENSMUST00000173316 462 ntBASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Gm6931-201ENSMUST00000183103 371 ntBASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Gm21614-201ENSMUST00000183260 1005 ntBASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Gm7804-202ENSMUST00000194187 854 ntBASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Gm5711-201ENSMUST00000197896 421 ntBASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms