Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC9.37□□□□□ -0.91
Usp48Q3V0C5 Stox2-202ENSMUST00000110367 3424 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Usp48Q3V0C5 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Usp48Q3V0C5 Gm44104-201ENSMUST00000204736 3777 ntBASIC9.37□□□□□ -0.91
Usp48Q3V0C5 Bicc1-202ENSMUST00000131445 3005 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Usp48Q3V0C5 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Trpv5-201ENSMUST00000031901 3243 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Gm11922-201ENSMUST00000118967 475 ntBASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Gm15361-201ENSMUST00000119320 444 ntBASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Gm15194-201ENSMUST00000120453 434 ntBASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Gm9208-201ENSMUST00000120468 948 ntBASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Gm15192-201ENSMUST00000121005 293 ntBASIC9.36□□□□□ -0.91
Usp48Q3V0C5 n-R5s47-201ENSMUST00000122516 119 ntBASIC9.36□□□□□ -0.91
Usp48Q3V0C5 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Cfhr3-201ENSMUST00000170441 1022 ntBASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Gm29145-201ENSMUST00000189914 456 ntBASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Mir1892-201ENSMUST00000197752 80 ntBASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 AC153561.1-201ENSMUST00000215943 469 ntBASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Gm19987-201ENSMUST00000216339 499 ntBASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Gm18039-201ENSMUST00000217816 728 ntBASIC9.36□□□□□ -0.91
Usp48Q3V0C5 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 A1cf-203ENSMUST00000224400 1204 ntBASIC9.36□□□□□ -0.91
Usp48Q3V0C5 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC9.36□□□□□ -0.91
Usp48Q3V0C5 AC154594.1-201ENSMUST00000225171 1273 ntBASIC9.36□□□□□ -0.91
Usp48Q3V0C5 CT030194.2-201ENSMUST00000225752 379 ntBASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Anapc15-210ENSMUST00000144207 3103 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usp48Q3V0C5 Khdc1a-201ENSMUST00000088407 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Gm42700-201ENSMUST00000199071 2437 ntBASIC9.35□□□□□ -0.91
Usp48Q3V0C5 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp48Q3V0C5 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Igkv3-4-201ENSMUST00000103401 360 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Gm13525-201ENSMUST00000120607 478 ntBASIC9.35□□□□□ -0.91
Usp48Q3V0C5 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Gm26025-201ENSMUST00000158655 271 ntBASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Gm2959-201ENSMUST00000169844 621 ntBASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Gm8046-201ENSMUST00000172151 616 ntBASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Gm8321-201ENSMUST00000181691 980 ntBASIC9.35□□□□□ -0.91
Usp48Q3V0C5 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Gm18865-201ENSMUST00000193011 1171 ntBASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Gm31306-201ENSMUST00000197517 508 ntBASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Gm9256-201ENSMUST00000198106 1420 ntBASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Gm6366-201ENSMUST00000198766 826 ntBASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Gm18765-201ENSMUST00000203166 660 ntBASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Gm45240-201ENSMUST00000211437 674 ntBASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Gm45534-201ENSMUST00000211449 2339 ntBASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Gm8275-201ENSMUST00000219732 424 ntBASIC9.35□□□□□ -0.91
Usp48Q3V0C5 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC9.35□□□□□ -0.91
Usp48Q3V0C5 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp48Q3V0C5 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC9.35□□□□□ -0.91
Usp48Q3V0C5 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms