Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Trim43aQ3TL54 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Gm37891-201ENSMUST00000195585 1326 ntBASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Cmah-208ENSMUST00000224819 9482 ntBASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Gm12642-201ENSMUST00000121098 876 ntBASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Gm5791-201ENSMUST00000220840 489 ntBASIC7.42□□□□□ -1.22
Trim43aQ3TL54 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 AC154487.1-201ENSMUST00000224649 226 ntBASIC7.42□□□□□ -1.22
Trim43aQ3TL54 AC156790.1-201ENSMUST00000226572 559 ntBASIC7.42□□□□□ -1.22
Trim43aQ3TL54 AC166822.1-201ENSMUST00000227667 636 ntBASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Gm15229-201ENSMUST00000146636 1398 ntBASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim43aQ3TL54 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Gm44194-201ENSMUST00000204222 3229 ntBASIC7.41□□□□□ -1.22
Trim43aQ3TL54 AC154406.1-201ENSMUST00000215220 2529 ntBASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Gm25276-201ENSMUST00000104300 124 ntBASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Gm24986-201ENSMUST00000104452 132 ntBASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Gm8624-201ENSMUST00000118083 432 ntBASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Gm4308-201ENSMUST00000179735 914 ntBASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Gm5300-201ENSMUST00000182201 1003 ntBASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Gm5181-201ENSMUST00000183140 971 ntBASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Gm46231-201ENSMUST00000220152 314 ntBASIC7.41□□□□□ -1.22
Trim43aQ3TL54 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 AV026068-219ENSMUST00000224148 933 ntBASIC7.41□□□□□ -1.22
Trim43aQ3TL54 CT009556.4-201ENSMUST00000227092 200 ntBASIC7.41□□□□□ -1.22
Trim43aQ3TL54 AC139209.2-201ENSMUST00000227680 1208 ntBASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Gm24613-201ENSMUST00000083266 130 ntBASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Gm43876-201ENSMUST00000203831 3229 ntBASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Gm37925-201ENSMUST00000195352 4255 ntBASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms