Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx3-1P97436 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Nkx3-1P97436 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx3-1P97436 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Gm37783-201ENSMUST00000192025 1856 ntBASIC6.16□□□□□ -1.42
Nkx3-1P97436 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Gm24048-201ENSMUST00000102411 106 ntBASIC6.16□□□□□ -1.42
Nkx3-1P97436 Gm24519-201ENSMUST00000104507 132 ntBASIC6.16□□□□□ -1.42
Nkx3-1P97436 Gm12710-201ENSMUST00000119011 216 ntBASIC6.16□□□□□ -1.42
Nkx3-1P97436 Gm8312-201ENSMUST00000119380 618 ntBASIC6.16□□□□□ -1.42
Nkx3-1P97436 Gm15081-201ENSMUST00000119794 844 ntBASIC6.16□□□□□ -1.42
Nkx3-1P97436 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Gm25969-201ENSMUST00000157166 132 ntBASIC6.16□□□□□ -1.42
Nkx3-1P97436 Gm26323-201ENSMUST00000157743 175 ntBASIC6.16□□□□□ -1.42
Nkx3-1P97436 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx3-1P97436 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC6.16□□□□□ -1.42
Nkx3-1P97436 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC6.16□□□□□ -1.42
Nkx3-1P97436 Gm37669-201ENSMUST00000192184 820 ntBASIC6.16□□□□□ -1.42
Nkx3-1P97436 Gm4860-201ENSMUST00000200368 454 ntBASIC6.16□□□□□ -1.42
Nkx3-1P97436 Gm44896-201ENSMUST00000206190 772 ntBASIC6.16□□□□□ -1.42
Nkx3-1P97436 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Gm9357-201ENSMUST00000207138 805 ntBASIC6.16□□□□□ -1.42
Nkx3-1P97436 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Gm2975-201ENSMUST00000209710 820 ntBASIC6.16□□□□□ -1.42
Nkx3-1P97436 Gm34424-201ENSMUST00000213400 782 ntBASIC6.16□□□□□ -1.42
Nkx3-1P97436 AL591207.2-201ENSMUST00000222991 337 ntBASIC6.16□□□□□ -1.42
Nkx3-1P97436 AC121542.2-201ENSMUST00000227529 400 ntBASIC6.16□□□□□ -1.42
Nkx3-1P97436 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Grik1-209ENSMUST00000227986 2942 ntBASIC6.16□□□□□ -1.42
Nkx3-1P97436 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx3-1P97436 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC6.16□□□□□ -1.42
Nkx3-1P97436 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx3-1P97436 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Nkx3-1P97436 AC159196.3-201ENSMUST00000224307 1841 ntBASIC6.15□□□□□ -1.42
Nkx3-1P97436 AC153729.1-201ENSMUST00000214055 2562 ntBASIC6.15□□□□□ -1.42
Nkx3-1P97436 AC187103.1-201ENSMUST00000224641 1475 ntBASIC6.15□□□□□ -1.42
Nkx3-1P97436 Gm42636-201ENSMUST00000197174 2239 ntBASIC6.15□□□□□ -1.42
Nkx3-1P97436 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC6.15□□□□□ -1.42
Nkx3-1P97436 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Nkx3-1P97436 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Nkx3-1P97436 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Nkx3-1P97436 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Nkx3-1P97436 Gm6679-201ENSMUST00000191467 1869 ntBASIC6.15□□□□□ -1.42
Nkx3-1P97436 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Nkx3-1P97436 Dennd6a-203ENSMUST00000224111 2692 ntBASIC6.15□□□□□ -1.42
Nkx3-1P97436 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC6.15□□□□□ -1.42
Nkx3-1P97436 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Nkx3-1P97436 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Nkx3-1P97436 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Nkx3-1P97436 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
Nkx3-1P97436 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Nkx3-1P97436 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Nkx3-1P97436 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC6.15□□□□□ -1.42
Nkx3-1P97436 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Nkx3-1P97436 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Nkx3-1P97436 Gm2178-201ENSMUST00000104927 357 ntBASIC6.15□□□□□ -1.42
Nkx3-1P97436 Gm12468-201ENSMUST00000116189 404 ntBASIC6.15□□□□□ -1.42
Nkx3-1P97436 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC6.15□□□□□ -1.42
Nkx3-1P97436 Gm15203-201ENSMUST00000117668 455 ntBASIC6.15□□□□□ -1.42
Nkx3-1P97436 Gm13183-201ENSMUST00000118615 789 ntBASIC6.15□□□□□ -1.42
Nkx3-1P97436 Gm11370-201ENSMUST00000120583 260 ntBASIC6.15□□□□□ -1.42
Nkx3-1P97436 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC6.15□□□□□ -1.42
Nkx3-1P97436 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Nkx3-1P97436 Gm25556-201ENSMUST00000158077 144 ntBASIC6.15□□□□□ -1.42
Nkx3-1P97436 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC6.15□□□□□ -1.42
Nkx3-1P97436 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Nkx3-1P97436 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC6.15□□□□□ -1.42
Nkx3-1P97436 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC6.15□□□□□ -1.42
Nkx3-1P97436 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Nkx3-1P97436 Gm17834-201ENSMUST00000204322 891 ntBASIC6.15□□□□□ -1.42
Nkx3-1P97436 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC6.15□□□□□ -1.42
Nkx3-1P97436 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC6.15□□□□□ -1.42
Nkx3-1P97436 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC6.15□□□□□ -1.42
Nkx3-1P97436 Gm2221-201ENSMUST00000209342 418 ntBASIC6.15□□□□□ -1.42
Nkx3-1P97436 Gm7351-201ENSMUST00000210745 580 ntBASIC6.15□□□□□ -1.42
Nkx3-1P97436 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms