Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
H3f3aP84244 AC159264.1-202ENSMUST00000224856 3162 ntBASIC6.27□□□□□ -1.41
H3f3aP84244 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
H3f3aP84244 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC6.27□□□□□ -1.41
H3f3aP84244 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
H3f3aP84244 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
H3f3aP84244 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
H3f3aP84244 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
H3f3aP84244 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H3f3aP84244 Mir697-201ENSMUST00000102316 109 ntBASIC6.27□□□□□ -1.41
H3f3aP84244 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
H3f3aP84244 Gm13260-201ENSMUST00000117797 1264 ntBASIC6.27□□□□□ -1.41
H3f3aP84244 Gm13744-201ENSMUST00000118953 850 ntBASIC6.27□□□□□ -1.41
H3f3aP84244 Gm14869-201ENSMUST00000119007 884 ntBASIC6.27□□□□□ -1.41
H3f3aP84244 Gm13900-201ENSMUST00000119402 498 ntBASIC6.27□□□□□ -1.41
H3f3aP84244 Gm9439-201ENSMUST00000119554 973 ntBASIC6.27□□□□□ -1.41
H3f3aP84244 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H3f3aP84244 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H3f3aP84244 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H3f3aP84244 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H3f3aP84244 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
H3f3aP84244 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H3f3aP84244 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
H3f3aP84244 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
H3f3aP84244 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H3f3aP84244 Gm4373-201ENSMUST00000178571 556 ntBASIC6.27□□□□□ -1.41
H3f3aP84244 Gm26528-201ENSMUST00000181965 283 ntBASIC6.27□□□□□ -1.41
H3f3aP84244 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC6.27□□□□□ -1.41
H3f3aP84244 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC6.27□□□□□ -1.41
H3f3aP84244 Gm18752-201ENSMUST00000192876 608 ntBASIC6.27□□□□□ -1.41
H3f3aP84244 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
H3f3aP84244 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC6.27□□□□□ -1.41
H3f3aP84244 Gm38840-201ENSMUST00000204716 843 ntBASIC6.27□□□□□ -1.41
H3f3aP84244 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H3f3aP84244 Gm44833-201ENSMUST00000208368 331 ntBASIC6.27□□□□□ -1.41
H3f3aP84244 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC6.27□□□□□ -1.41
H3f3aP84244 Gm18655-201ENSMUST00000214802 1090 ntBASIC6.27□□□□□ -1.41
H3f3aP84244 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC6.27□□□□□ -1.41
H3f3aP84244 Snora21-201ENSMUST00000082967 137 ntBASIC6.27□□□□□ -1.41
H3f3aP84244 Gm6166-201ENSMUST00000098689 409 ntBASIC6.27□□□□□ -1.41
H3f3aP84244 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H3f3aP84244 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
H3f3aP84244 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
H3f3aP84244 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
H3f3aP84244 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
H3f3aP84244 AC122769.1-201ENSMUST00000226930 1714 ntBASIC6.27□□□□□ -1.41
H3f3aP84244 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
H3f3aP84244 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
H3f3aP84244 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
H3f3aP84244 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
H3f3aP84244 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC6.27□□□□□ -1.41
H3f3aP84244 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
H3f3aP84244 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC6.27□□□□□ -1.41
H3f3aP84244 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
H3f3aP84244 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
H3f3aP84244 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
H3f3aP84244 Mbnl2-203ENSMUST00000226800 3328 ntBASIC6.27□□□□□ -1.41
H3f3aP84244 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
H3f3aP84244 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
H3f3aP84244 Gm44121-201ENSMUST00000205169 2006 ntBASIC6.26□□□□□ -1.41
H3f3aP84244 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3f3aP84244 AC159624.1-201ENSMUST00000217762 1344 ntBASIC6.26□□□□□ -1.41
H3f3aP84244 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3f3aP84244 Gm20749-201ENSMUST00000186319 3492 ntBASIC6.26□□□□□ -1.41
H3f3aP84244 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3f3aP84244 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3f3aP84244 Mir760-201ENSMUST00000103257 119 ntBASIC6.26□□□□□ -1.41
H3f3aP84244 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
H3f3aP84244 Gm25916-201ENSMUST00000104263 131 ntBASIC6.26□□□□□ -1.41
H3f3aP84244 Gm23527-201ENSMUST00000104570 130 ntBASIC6.26□□□□□ -1.41
H3f3aP84244 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC6.26□□□□□ -1.41
H3f3aP84244 Gm6743-201ENSMUST00000117345 1066 ntBASIC6.26□□□□□ -1.41
H3f3aP84244 Gm13221-201ENSMUST00000121712 430 ntBASIC6.26□□□□□ -1.41
H3f3aP84244 Gm12518-201ENSMUST00000122075 779 ntBASIC6.26□□□□□ -1.41
H3f3aP84244 Gm17212-201ENSMUST00000166666 259 ntBASIC6.26□□□□□ -1.41
H3f3aP84244 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
H3f3aP84244 Gm7651-201ENSMUST00000173398 901 ntBASIC6.26□□□□□ -1.41
H3f3aP84244 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
H3f3aP84244 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC6.26□□□□□ -1.41
H3f3aP84244 Gm37689-201ENSMUST00000193139 275 ntBASIC6.26□□□□□ -1.41
H3f3aP84244 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
H3f3aP84244 Gm7512-201ENSMUST00000195217 1170 ntBASIC6.26□□□□□ -1.41
H3f3aP84244 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
H3f3aP84244 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC6.26□□□□□ -1.41
H3f3aP84244 Gm3511-201ENSMUST00000199823 204 ntBASIC6.26□□□□□ -1.41
H3f3aP84244 Gm45509-201ENSMUST00000209624 1229 ntBASIC6.26□□□□□ -1.41
H3f3aP84244 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC6.26□□□□□ -1.41
H3f3aP84244 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC6.26□□□□□ -1.41
H3f3aP84244 Gm19238-201ENSMUST00000221936 1260 ntBASIC6.26□□□□□ -1.41
H3f3aP84244 Gm9315-201ENSMUST00000222696 908 ntBASIC6.26□□□□□ -1.41
H3f3aP84244 AC154849.2-201ENSMUST00000223781 974 ntBASIC6.26□□□□□ -1.41
H3f3aP84244 AC125019.1-201ENSMUST00000224809 908 ntBASIC6.26□□□□□ -1.41
H3f3aP84244 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC6.26□□□□□ -1.41
H3f3aP84244 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
H3f3aP84244 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
H3f3aP84244 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC6.26□□□□□ -1.41
H3f3aP84244 Gm44289-201ENSMUST00000204144 1390 ntBASIC6.26□□□□□ -1.41
H3f3aP84244 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
H3f3aP84244 Gm44101-201ENSMUST00000203951 2221 ntBASIC6.26□□□□□ -1.41
H3f3aP84244 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 157.7 ms