Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm44538-201ENSMUST00000205615 348 ntBASIC8.97□□□□□ -0.97
Msh6P54276 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Msh6P54276 CT009711.2-201ENSMUST00000225352 934 ntBASIC8.97□□□□□ -0.97
Msh6P54276 AC125405.2-201ENSMUST00000227862 383 ntBASIC8.97□□□□□ -0.97
Msh6P54276 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Msh6P54276 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Msh6P54276 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Msh6P54276 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Msh6P54276 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Msh6P54276 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Msh6P54276 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Msh6P54276 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Msh6P54276 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Msh6P54276 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Msh6P54276 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Msh6P54276 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Msh6P54276 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Msh6P54276 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC8.96□□□□□ -0.98
Msh6P54276 Gm14896-201ENSMUST00000121311 1351 ntBASIC8.96□□□□□ -0.98
Msh6P54276 Gm15229-201ENSMUST00000146636 1398 ntBASIC8.96□□□□□ -0.98
Msh6P54276 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Msh6P54276 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Msh6P54276 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Msh6P54276 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Msh6P54276 Gm14865-201ENSMUST00000117523 494 ntBASIC8.96□□□□□ -0.98
Msh6P54276 Gm14202-201ENSMUST00000120121 311 ntBASIC8.96□□□□□ -0.98
Msh6P54276 Gm14070-201ENSMUST00000120773 428 ntBASIC8.96□□□□□ -0.98
Msh6P54276 BC064078-201ENSMUST00000122939 570 ntBASIC8.96□□□□□ -0.98
Msh6P54276 Gm5970-201ENSMUST00000131638 1216 ntBASIC8.96□□□□□ -0.98
Msh6P54276 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC8.96□□□□□ -0.98
Msh6P54276 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Msh6P54276 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC8.96□□□□□ -0.98
Msh6P54276 Gm43762-201ENSMUST00000201521 295 ntBASIC8.96□□□□□ -0.98
Msh6P54276 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Msh6P54276 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC8.96□□□□□ -0.98
Msh6P54276 CT009495.1-201ENSMUST00000224221 862 ntBASIC8.96□□□□□ -0.98
Msh6P54276 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Msh6P54276 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Msh6P54276 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Msh6P54276 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Msh6P54276 Gm45407-201ENSMUST00000209499 3676 ntBASIC8.96□□□□□ -0.98
Msh6P54276 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Msh6P54276 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Msh6P54276 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Msh6P54276 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Msh6P54276 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Msh6P54276 Gm14802-201ENSMUST00000121944 1885 ntBASIC8.95□□□□□ -0.98
Msh6P54276 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Msh6P54276 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC8.95□□□□□ -0.98
Msh6P54276 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Msh6P54276 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Msh6P54276 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
Msh6P54276 Gm45635-201ENSMUST00000211516 2134 ntBASIC8.95□□□□□ -0.98
Msh6P54276 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Msh6P54276 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Msh6P54276 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Msh6P54276 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Msh6P54276 Gm43339-201ENSMUST00000200032 1606 ntBASIC8.95□□□□□ -0.98
Msh6P54276 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Msh6P54276 Gm11622-201ENSMUST00000120525 691 ntBASIC8.95□□□□□ -0.98
Msh6P54276 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Msh6P54276 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Msh6P54276 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Msh6P54276 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC8.95□□□□□ -0.98
Msh6P54276 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Msh6P54276 Gm43459-201ENSMUST00000202093 331 ntBASIC8.95□□□□□ -0.98
Msh6P54276 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC8.95□□□□□ -0.98
Msh6P54276 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC8.95□□□□□ -0.98
Msh6P54276 Gm5928-201ENSMUST00000221839 466 ntBASIC8.95□□□□□ -0.98
Msh6P54276 AC164436.1-201ENSMUST00000227074 772 ntBASIC8.95□□□□□ -0.98
Msh6P54276 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Msh6P54276 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Msh6P54276 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC8.95□□□□□ -0.98
Msh6P54276 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
Msh6P54276 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC8.95□□□□□ -0.98
Msh6P54276 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Msh6P54276 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Msh6P54276 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Msh6P54276 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Msh6P54276 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Msh6P54276 Gm43497-201ENSMUST00000201137 2316 ntBASIC8.94□□□□□ -0.98
Msh6P54276 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Msh6P54276 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC8.94□□□□□ -0.98
Msh6P54276 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Msh6P54276 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Msh6P54276 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Msh6P54276 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Msh6P54276 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Msh6P54276 AC159264.1-202ENSMUST00000224856 3162 ntBASIC8.94□□□□□ -0.98
Msh6P54276 Gm18248-201ENSMUST00000191164 1846 ntBASIC8.94□□□□□ -0.98
Msh6P54276 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Msh6P54276 Gm26967-201ENSMUST00000182878 2303 ntBASIC8.94□□□□□ -0.98
Msh6P54276 Gm22374-201ENSMUST00000104583 132 ntBASIC8.94□□□□□ -0.98
Msh6P54276 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Msh6P54276 Snord88a-201ENSMUST00000116723 90 ntBASIC8.94□□□□□ -0.98
Msh6P54276 Gm12101-201ENSMUST00000121590 390 ntBASIC8.94□□□□□ -0.98
Msh6P54276 Gm13237-201ENSMUST00000122151 635 ntBASIC8.94□□□□□ -0.98
Msh6P54276 Gm15242-201ENSMUST00000122459 283 ntBASIC8.94□□□□□ -0.98
Msh6P54276 Gm22275-201ENSMUST00000122470 310 ntBASIC8.94□□□□□ -0.98
Msh6P54276 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms