Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Sox3P53784 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox3P53784 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC6.82□□□□□ -1.32
Sox3P53784 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox3P53784 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox3P53784 Gm43189-201ENSMUST00000196040 3069 ntBASIC6.82□□□□□ -1.32
Sox3P53784 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC6.82□□□□□ -1.32
Sox3P53784 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox3P53784 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox3P53784 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox3P53784 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC6.82□□□□□ -1.32
Sox3P53784 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox3P53784 Gm8662-201ENSMUST00000118644 574 ntBASIC6.82□□□□□ -1.32
Sox3P53784 Gm12024-201ENSMUST00000118819 1253 ntBASIC6.82□□□□□ -1.32
Sox3P53784 Gm12844-201ENSMUST00000119463 582 ntBASIC6.82□□□□□ -1.32
Sox3P53784 Gm13495-201ENSMUST00000121156 537 ntBASIC6.82□□□□□ -1.32
Sox3P53784 Gm14847-201ENSMUST00000121978 519 ntBASIC6.82□□□□□ -1.32
Sox3P53784 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC6.82□□□□□ -1.32
Sox3P53784 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox3P53784 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC6.82□□□□□ -1.32
Sox3P53784 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox3P53784 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
Sox3P53784 Gm5656-201ENSMUST00000171020 1096 ntBASIC6.82□□□□□ -1.32
Sox3P53784 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Sox3P53784 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox3P53784 Gm27218-201ENSMUST00000183745 392 ntBASIC6.82□□□□□ -1.32
Sox3P53784 Mir7084-201ENSMUST00000183876 70 ntBASIC6.82□□□□□ -1.32
Sox3P53784 Mir6241-201ENSMUST00000184225 103 ntBASIC6.82□□□□□ -1.32
Sox3P53784 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC6.82□□□□□ -1.32
Sox3P53784 Gm18799-201ENSMUST00000189104 913 ntBASIC6.82□□□□□ -1.32
Sox3P53784 Gm43555-201ENSMUST00000196588 310 ntBASIC6.82□□□□□ -1.32
Sox3P53784 AC117240.1-201ENSMUST00000199436 61 ntBASIC6.82□□□□□ -1.32
Sox3P53784 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC6.82□□□□□ -1.32
Sox3P53784 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox3P53784 Gm2040-201ENSMUST00000202979 289 ntBASIC6.82□□□□□ -1.32
Sox3P53784 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox3P53784 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox3P53784 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Sox3P53784 AC163296.1-202ENSMUST00000218395 661 ntBASIC6.82□□□□□ -1.32
Sox3P53784 AC163296.1-201ENSMUST00000220004 1266 ntBASIC6.82□□□□□ -1.32
Sox3P53784 AC114572.1-201ENSMUST00000227262 300 ntBASIC6.82□□□□□ -1.32
Sox3P53784 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox3P53784 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Sox3P53784 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox3P53784 Gm38009-201ENSMUST00000194884 3341 ntBASIC6.82□□□□□ -1.32
Sox3P53784 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox3P53784 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox3P53784 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Sox3P53784 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Sox3P53784 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
Sox3P53784 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC6.82□□□□□ -1.32
Sox3P53784 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox3P53784 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Sox3P53784 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox3P53784 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox3P53784 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox3P53784 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox3P53784 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox3P53784 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC6.81□□□□□ -1.32
Sox3P53784 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sox3P53784 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sox3P53784 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sox3P53784 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
Sox3P53784 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sox3P53784 Gm22374-201ENSMUST00000104583 132 ntBASIC6.81□□□□□ -1.32
Sox3P53784 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Sox3P53784 Gm17170-201ENSMUST00000112785 316 ntBASIC6.81□□□□□ -1.32
Sox3P53784 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Sox3P53784 Gm13313-201ENSMUST00000118938 1084 ntBASIC6.81□□□□□ -1.32
Sox3P53784 Gm13545-201ENSMUST00000119044 482 ntBASIC6.81□□□□□ -1.32
Sox3P53784 Gm8421-201ENSMUST00000119439 305 ntBASIC6.81□□□□□ -1.32
Sox3P53784 Gm12890-201ENSMUST00000120885 373 ntBASIC6.81□□□□□ -1.32
Sox3P53784 Gm12140-201ENSMUST00000121214 544 ntBASIC6.81□□□□□ -1.32
Sox3P53784 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC6.81□□□□□ -1.32
Sox3P53784 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sox3P53784 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sox3P53784 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC6.81□□□□□ -1.32
Sox3P53784 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC6.81□□□□□ -1.32
Sox3P53784 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sox3P53784 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sox3P53784 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC6.81□□□□□ -1.32
Sox3P53784 Gm8609-201ENSMUST00000182967 998 ntBASIC6.81□□□□□ -1.32
Sox3P53784 Mir7033-201ENSMUST00000184259 81 ntBASIC6.81□□□□□ -1.32
Sox3P53784 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC6.81□□□□□ -1.32
Sox3P53784 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sox3P53784 Gm29008-201ENSMUST00000189387 298 ntBASIC6.81□□□□□ -1.32
Sox3P53784 Gm7019-201ENSMUST00000194122 369 ntBASIC6.81□□□□□ -1.32
Sox3P53784 Gm42424-201ENSMUST00000198319 376 ntBASIC6.81□□□□□ -1.32
Sox3P53784 Gm45485-201ENSMUST00000211229 357 ntBASIC6.81□□□□□ -1.32
Sox3P53784 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC6.81□□□□□ -1.32
Sox3P53784 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox3P53784 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC6.81□□□□□ -1.32
Sox3P53784 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Sox3P53784 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC6.81□□□□□ -1.32
Sox3P53784 AC161247.1-201ENSMUST00000217744 2295 ntBASIC6.81□□□□□ -1.32
Sox3P53784 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox3P53784 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC6.81□□□□□ -1.32
Sox3P53784 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sox3P53784 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox3P53784 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms