Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
P20040 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
P20040 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
P20040 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
P20040 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
P20040 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC6.23□□□□□ -1.41
P20040 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.23□□□□□ -1.41
P20040 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
P20040 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
P20040 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
P20040 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
P20040 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
P20040 Gm37169-201ENSMUST00000195599 4161 ntBASIC6.22□□□□□ -1.41
P20040 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
P20040 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
P20040 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
P20040 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
P20040 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
P20040 Gm36981-201ENSMUST00000192340 4485 ntBASIC6.22□□□□□ -1.41
P20040 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
P20040 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC6.22□□□□□ -1.41
P20040 Gm37530-201ENSMUST00000191759 4932 ntBASIC6.22□□□□□ -1.41
P20040 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.22□□□□□ -1.41
P20040 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
P20040 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
P20040 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
P20040 Gm17184-201ENSMUST00000111864 462 ntBASIC6.22□□□□□ -1.41
P20040 Serpina3h-202ENSMUST00000116393 1226 ntBASIC6.22□□□□□ -1.41
P20040 Gm16044-201ENSMUST00000118475 450 ntBASIC6.22□□□□□ -1.41
P20040 Gm11850-201ENSMUST00000119679 479 ntBASIC6.22□□□□□ -1.41
P20040 Gm11198-201ENSMUST00000119771 974 ntBASIC6.22□□□□□ -1.41
P20040 Gm11371-201ENSMUST00000120294 385 ntBASIC6.22□□□□□ -1.41
P20040 Gm15158-201ENSMUST00000120577 570 ntBASIC6.22□□□□□ -1.41
P20040 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC6.22□□□□□ -1.41
P20040 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
P20040 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC6.22□□□□□ -1.41
P20040 Gm5611-201ENSMUST00000164523 852 ntBASIC6.22□□□□□ -1.41
P20040 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC6.22□□□□□ -1.41
P20040 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
P20040 Gm27018-201ENSMUST00000181136 225 ntBASIC6.22□□□□□ -1.41
P20040 Mir8094-201ENSMUST00000183361 117 ntBASIC6.22□□□□□ -1.41
P20040 Gm27401-201ENSMUST00000184052 173 ntBASIC6.22□□□□□ -1.41
P20040 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC6.22□□□□□ -1.41
P20040 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC6.22□□□□□ -1.41
P20040 Gm17965-201ENSMUST00000193904 517 ntBASIC6.22□□□□□ -1.41
P20040 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
P20040 Gm9710-201ENSMUST00000198053 499 ntBASIC6.22□□□□□ -1.41
P20040 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC6.22□□□□□ -1.41
P20040 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC6.22□□□□□ -1.41
P20040 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
P20040 Gm18562-201ENSMUST00000209949 915 ntBASIC6.22□□□□□ -1.41
P20040 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC6.22□□□□□ -1.41
P20040 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
P20040 AC117949.1-201ENSMUST00000225547 419 ntBASIC6.22□□□□□ -1.41
P20040 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
P20040 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
P20040 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
P20040 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
P20040 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
P20040 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
P20040 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
P20040 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
P20040 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
P20040 Klf5-202ENSMUST00000226784 2852 ntBASIC6.21□□□□□ -1.41
P20040 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
P20040 CT025639.1-201ENSMUST00000223906 1375 ntBASIC6.21□□□□□ -1.41
P20040 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC6.21□□□□□ -1.41
P20040 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.42
P20040 CT010453.1-201ENSMUST00000226795 2201 ntBASIC6.21□□□□□ -1.42
P20040 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC6.21□□□□□ -1.42
P20040 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC6.21□□□□□ -1.42
P20040 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
P20040 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
P20040 Gm23527-201ENSMUST00000104570 130 ntBASIC6.21□□□□□ -1.42
P20040 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC6.21□□□□□ -1.42
P20040 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
P20040 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
P20040 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.21□□□□□ -1.42
P20040 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC6.21□□□□□ -1.42
P20040 Gm15644-201ENSMUST00000121764 387 ntBASIC6.21□□□□□ -1.42
P20040 Gm22795-201ENSMUST00000157233 118 ntBASIC6.21□□□□□ -1.42
P20040 Gm22882-201ENSMUST00000157749 124 ntBASIC6.21□□□□□ -1.42
P20040 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
P20040 Gm16027-201ENSMUST00000161618 758 ntBASIC6.21□□□□□ -1.42
P20040 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC6.21□□□□□ -1.42
P20040 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC6.21□□□□□ -1.42
P20040 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
P20040 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
P20040 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
P20040 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC6.21□□□□□ -1.42
P20040 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC6.21□□□□□ -1.42
P20040 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC6.21□□□□□ -1.42
P20040 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC6.21□□□□□ -1.42
P20040 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC6.21□□□□□ -1.42
P20040 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
P20040 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
P20040 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
P20040 Gm36935-201ENSMUST00000192526 292 ntBASIC6.21□□□□□ -1.42
P20040 Gm37322-201ENSMUST00000193409 337 ntBASIC6.21□□□□□ -1.42
P20040 Gm38063-201ENSMUST00000193990 342 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms