Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Taf1-202ENSMUST00000118878 7210 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Ly6c1P0CW02 2900026A02Rik-202ENSMUST00000211733 10238 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Ly6c1P0CW02 Cacna1d-202ENSMUST00000112250 8688 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ly6c1P0CW02 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ly6c1P0CW02 Cyld-205ENSMUST00000209532 7990 ntAPPRIS ALT1 TSL 5 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Tirap-201ENSMUST00000175765 4589 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Zscan26-202ENSMUST00000110485 4366 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 9130214F15Rik-201ENSMUST00000208727 1653 ntBASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Zscan21-205ENSMUST00000110961 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Cyp2c50-202ENSMUST00000080171 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Hnrnph2-204ENSMUST00000113202 3988 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 1700010N08Rik-202ENSMUST00000188166 1323 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Slamf9-201ENSMUST00000027830 1313 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Strn-201ENSMUST00000024881 2967 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Ttc16-201ENSMUST00000066478 2979 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Cd99l2-201ENSMUST00000037391 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Ovgp1-201ENSMUST00000000573 2616 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Gm15283-201ENSMUST00000125308 1451 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Trim39-205ENSMUST00000173369 2914 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Ing5-201ENSMUST00000027505 4533 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Gm18637-201ENSMUST00000217665 1900 ntBASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Elp3-201ENSMUST00000022609 2851 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Gm25501-201ENSMUST00000104429 132 ntBASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Mir669g-201ENSMUST00000116809 123 ntBASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Mir467f-201ENSMUST00000116923 120 ntBASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Gm11624-201ENSMUST00000118579 1041 ntBASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Gm11533-201ENSMUST00000120287 477 ntBASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Gm11440-201ENSMUST00000121509 527 ntBASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Gm16150-201ENSMUST00000127620 437 ntTSL 5 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Kcnab3os-201ENSMUST00000136196 566 ntTSL 3 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Gm15756-201ENSMUST00000161447 670 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Rasgef1b-207ENSMUST00000166484 1296 ntTSL 5 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Gm28609-201ENSMUST00000186515 463 ntTSL 3 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Gm43218-201ENSMUST00000196275 344 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Gm43129-201ENSMUST00000201237 603 ntTSL 3 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Gm44048-201ENSMUST00000204531 361 ntBASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Gm9535-201ENSMUST00000218499 768 ntBASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Gm2139-201ENSMUST00000222569 1075 ntBASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 AL606472.1-201ENSMUST00000224628 275 ntBASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Man2b1-201ENSMUST00000034121 3822 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Oard1-201ENSMUST00000046651 1135 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Spag11a-201ENSMUST00000058955 436 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Tarm1-201ENSMUST00000065703 892 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Gm26244-201ENSMUST00000083435 164 ntBASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Rab25-201ENSMUST00000008745 1081 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Patj-207ENSMUST00000107034 4799 ntTSL 5 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Gabrb2-201ENSMUST00000007797 3989 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 C87977-202ENSMUST00000105754 1407 ntAPPRIS ALT2 TSL 3 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Cwc22-201ENSMUST00000065889 3471 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Hnrnpk-205ENSMUST00000176207 2653 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Fbxo16-203ENSMUST00000224629 3781 ntAPPRIS P2 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Wdfy3-207ENSMUST00000212024 10539 ntTSL 5 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Nme8-201ENSMUST00000039340 1704 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Ttll1-203ENSMUST00000109480 1876 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Hcar1-201ENSMUST00000164267 3285 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 6820431F20Rik-202ENSMUST00000153748 4659 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Olfr338-203ENSMUST00000217511 5724 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Trim42-201ENSMUST00000035026 2463 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Syt11-201ENSMUST00000090945 4567 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Ftsj1-203ENSMUST00000115595 1656 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Plec-202ENSMUST00000054449 15018 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Gm7435-202ENSMUST00000216003 2424 ntBASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Slc2a9-210ENSMUST00000155634 3164 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Gpr35-203ENSMUST00000169198 4214 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Ptpre-204ENSMUST00000209979 4959 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Mpdz-201ENSMUST00000102830 7512 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Prpf4b-201ENSMUST00000077853 7844 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ly6c1P0CW02 Rab43-201ENSMUST00000032134 4308 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ly6c1P0CW02 Pax3-202ENSMUST00000087086 3863 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ly6c1P0CW02 Oprl1-201ENSMUST00000071585 2999 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ly6c1P0CW02 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ly6c1P0CW02 Gm37949-201ENSMUST00000192808 2091 ntBASIC7.05□□□□□ -1.28
Ly6c1P0CW02 Gm37065-203ENSMUST00000192498 1622 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ly6c1P0CW02 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC7.05□□□□□ -1.28
Ly6c1P0CW02 Nufip1-201ENSMUST00000022586 3974 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ly6c1P0CW02 Bach2-207ENSMUST00000171600 8493 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ly6c1P0CW02 Gm15496-201ENSMUST00000129578 2456 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms