Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Brpf1-201ENSMUST00000113117 4540 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Gm14251-201ENSMUST00000122133 279 ntBASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Gm4613-201ENSMUST00000165488 276 ntBASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Mir30b-201ENSMUST00000083542 96 ntBASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col6a3E9PWQ3 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 CT010505.3-201ENSMUST00000227835 1651 ntBASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Gm14614-201ENSMUST00000119873 384 ntBASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Gm25152-201ENSMUST00000157117 114 ntBASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Gm6290-201ENSMUST00000207666 1158 ntBASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Abhd2-201ENSMUST00000037315 6877 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Olfr1510-202ENSMUST00000215928 1934 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Gm3339-201ENSMUST00000163462 475 ntBASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Gm18995-201ENSMUST00000202981 520 ntBASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Snora21-201ENSMUST00000082967 137 ntBASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Gm38262-201ENSMUST00000194760 1382 ntBASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Gm16123-201ENSMUST00000118647 1517 ntBASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Gm29143-201ENSMUST00000189462 201 ntBASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Mir342-201ENSMUST00000083502 99 ntBASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Myo1f-201ENSMUST00000087605 3819 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Slco1b2-204ENSMUST00000203597 1965 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col6a3E9PWQ3 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Col6a3E9PWQ3 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Col6a3E9PWQ3 Ccdc14-201ENSMUST00000023532 4107 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Col6a3E9PWQ3 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Col6a3E9PWQ3 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC6.71□□□□□ -1.33
Col6a3E9PWQ3 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Col6a3E9PWQ3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Col6a3E9PWQ3 Zfp677-201ENSMUST00000056107 2909 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Col6a3E9PWQ3 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Col6a3E9PWQ3 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Col6a3E9PWQ3 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Col6a3E9PWQ3 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
Col6a3E9PWQ3 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Col6a3E9PWQ3 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Col6a3E9PWQ3 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Col6a3E9PWQ3 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Col6a3E9PWQ3 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Col6a3E9PWQ3 Gm37216-201ENSMUST00000193817 3478 ntBASIC6.71□□□□□ -1.33
Col6a3E9PWQ3 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms