Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 AC107742.1-201ENSMUST00000227769 1390 ntBASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 AC139941.2-201ENSMUST00000221565 1824 ntBASIC5.93□□□□□ -1.46
Gm3550W4VSN7 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm15778-201ENSMUST00000118469 608 ntBASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm13130-201ENSMUST00000119195 1166 ntBASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm11371-201ENSMUST00000120294 385 ntBASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm14990-201ENSMUST00000122354 445 ntBASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm25505-201ENSMUST00000157220 246 ntBASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm16026-205ENSMUST00000162923 641 ntBASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm3208-201ENSMUST00000168281 427 ntBASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm27401-201ENSMUST00000184052 173 ntBASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Mir6357-201ENSMUST00000184246 104 ntBASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm5147-201ENSMUST00000185999 794 ntBASIC5.93□□□□□ -1.46
Gm3550W4VSN7 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm37328-201ENSMUST00000193191 640 ntBASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm43387-201ENSMUST00000196896 1066 ntBASIC5.93□□□□□ -1.46
Gm3550W4VSN7 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm9240-201ENSMUST00000206527 742 ntBASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC5.93□□□□□ -1.46
Gm3550W4VSN7 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm19217-201ENSMUST00000218238 328 ntBASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm18112-201ENSMUST00000219862 1195 ntBASIC5.93□□□□□ -1.46
Gm3550W4VSN7 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm8616-201ENSMUST00000222175 1037 ntBASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm36758-201ENSMUST00000222594 310 ntBASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm18960-201ENSMUST00000222962 713 ntBASIC5.93□□□□□ -1.46
Gm3550W4VSN7 AC154747.4-201ENSMUST00000224802 903 ntBASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm6054-201ENSMUST00000078052 378 ntBASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm19583-201ENSMUST00000202993 1366 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Gm3550W4VSN7 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Gm3550W4VSN7 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC5.92□□□□□ -1.46
Gm3550W4VSN7 Gm37138-201ENSMUST00000194564 2089 ntBASIC5.92□□□□□ -1.46
Gm3550W4VSN7 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Gm3550W4VSN7 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
Gm3550W4VSN7 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Gm3550W4VSN7 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Gm3550W4VSN7 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC5.92□□□□□ -1.46
Gm3550W4VSN7 AC152922.2-201ENSMUST00000213353 3879 ntBASIC5.92□□□□□ -1.46
Gm3550W4VSN7 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Gm3550W4VSN7 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Gm3550W4VSN7 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC5.92□□□□□ -1.46
Gm3550W4VSN7 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Gm3550W4VSN7 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC5.92□□□□□ -1.46
Gm3550W4VSN7 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Gm3550W4VSN7 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Gm3550W4VSN7 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Gm3550W4VSN7 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC5.92□□□□□ -1.46
Gm3550W4VSN7 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Gm3550W4VSN7 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Gm3550W4VSN7 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Gm3550W4VSN7 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Gm3550W4VSN7 Gm17170-201ENSMUST00000112785 316 ntBASIC5.92□□□□□ -1.46
Gm3550W4VSN7 Gm13414-201ENSMUST00000117516 727 ntBASIC5.92□□□□□ -1.46
Gm3550W4VSN7 Gm15484-201ENSMUST00000118871 828 ntBASIC5.92□□□□□ -1.46
Gm3550W4VSN7 Gm12944-201ENSMUST00000119262 463 ntBASIC5.92□□□□□ -1.46
Gm3550W4VSN7 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC5.92□□□□□ -1.46
Gm3550W4VSN7 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC5.92□□□□□ -1.46
Gm3550W4VSN7 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms