Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm16044-201ENSMUST00000118475 450 ntBASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Gm6004-201ENSMUST00000173237 1116 ntBASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Gm6489-201ENSMUST00000178167 696 ntBASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Mir6769b-201ENSMUST00000184793 60 ntBASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Gm28801-201ENSMUST00000188761 449 ntBASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Gm38170-201ENSMUST00000195404 816 ntBASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 n-R5s169-201ENSMUST00000083110 120 ntBASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Gm7961-201ENSMUST00000201338 1436 ntBASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Upk3aQ9JKX8 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Gm5361-201ENSMUST00000211041 1498 ntBASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Gm44101-201ENSMUST00000203951 2221 ntBASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Gm30698-201ENSMUST00000214789 3198 ntBASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Gm11864-201ENSMUST00000116179 1220 ntBASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Gm14729-201ENSMUST00000118373 689 ntBASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Gm14728-201ENSMUST00000122196 492 ntBASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Gm22728-201ENSMUST00000158087 129 ntBASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Gm16138-201ENSMUST00000159341 821 ntBASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Mir3060-201ENSMUST00000175339 83 ntBASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Gm9419-201ENSMUST00000200672 567 ntBASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Gm2975-201ENSMUST00000209710 820 ntBASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Gm18226-201ENSMUST00000215261 521 ntBASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 AC154515.3-201ENSMUST00000225081 1159 ntBASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 AC106830.2-201ENSMUST00000226624 943 ntBASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 AC154806.5-204ENSMUST00000228900 867 ntBASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Gm24451-201ENSMUST00000083353 133 ntBASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Amy2b-201ENSMUST00000120184 1577 ntBASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Gm26645-201ENSMUST00000181076 1316 ntBASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Upk3aQ9JKX8 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Gm44441-201ENSMUST00000203642 2475 ntBASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Gm37745-201ENSMUST00000193304 8163 ntBASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Gm24519-201ENSMUST00000104507 132 ntBASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Gm13137-201ENSMUST00000118035 345 ntBASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Gm14503-201ENSMUST00000130337 1164 ntBASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 Gm25574-201ENSMUST00000175245 249 ntBASIC6.72□□□□□ -1.33
Upk3aQ9JKX8 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms