Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Trim8Q99PJ2 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC7.18□□□□□ -1.26
Trim8Q99PJ2 Gm18878-201ENSMUST00000223071 1443 ntBASIC7.18□□□□□ -1.26
Trim8Q99PJ2 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
Trim8Q99PJ2 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Trim8Q99PJ2 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
Trim8Q99PJ2 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim8Q99PJ2 Gm44675-201ENSMUST00000208188 2927 ntBASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Gm37090-201ENSMUST00000195694 4105 ntBASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Gm5255-201ENSMUST00000120125 642 ntBASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Gm11255-201ENSMUST00000120448 1180 ntBASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Gm15225-201ENSMUST00000120449 1017 ntBASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Gm1866-201ENSMUST00000120701 477 ntBASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Gm11954-201ENSMUST00000121403 349 ntBASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Gm26357-201ENSMUST00000158218 115 ntBASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Mir3060-201ENSMUST00000175339 83 ntBASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Gm3650-201ENSMUST00000180600 747 ntBASIC7.17□□□□□ -1.26
Trim8Q99PJ2 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Gm18699-201ENSMUST00000190713 243 ntBASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Gm40319-201ENSMUST00000199785 481 ntBASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Spaca7-203ENSMUST00000210276 715 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Gm45782-201ENSMUST00000212670 366 ntBASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 AC163296.1-202ENSMUST00000218395 661 ntBASIC7.17□□□□□ -1.26
Trim8Q99PJ2 AC163296.1-201ENSMUST00000220004 1266 ntBASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Gm40853-201ENSMUST00000221342 582 ntBASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Gm9255-201ENSMUST00000223225 581 ntBASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Gpihbp1-201ENSMUST00000023243 825 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 AU020206-202ENSMUST00000206358 3009 ntBASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Etnppl-202ENSMUST00000163620 1482 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Gm44014-201ENSMUST00000205150 1509 ntBASIC7.17□□□□□ -1.26
Trim8Q99PJ2 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Trim8Q99PJ2 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim8Q99PJ2 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim8Q99PJ2 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Trim8Q99PJ2 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
Trim8Q99PJ2 Gm42678-201ENSMUST00000197163 2221 ntBASIC7.16□□□□□ -1.26
Trim8Q99PJ2 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim8Q99PJ2 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim8Q99PJ2 Gm37060-201ENSMUST00000194997 2397 ntBASIC7.16□□□□□ -1.26
Trim8Q99PJ2 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim8Q99PJ2 Gm6823-201ENSMUST00000120791 1839 ntBASIC7.16□□□□□ -1.26
Trim8Q99PJ2 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim8Q99PJ2 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Trim8Q99PJ2 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC7.16□□□□□ -1.26
Trim8Q99PJ2 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Trim8Q99PJ2 Gm15079-201ENSMUST00000121943 216 ntBASIC7.16□□□□□ -1.26
Trim8Q99PJ2 Gm25845-201ENSMUST00000122588 310 ntBASIC7.16□□□□□ -1.26
Trim8Q99PJ2 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim8Q99PJ2 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim8Q99PJ2 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Trim8Q99PJ2 Gm6428-201ENSMUST00000161062 345 ntBASIC7.16□□□□□ -1.26
Trim8Q99PJ2 Gm17063-201ENSMUST00000168135 456 ntBASIC7.16□□□□□ -1.26
Trim8Q99PJ2 Gm8164-201ENSMUST00000169120 1192 ntBASIC7.16□□□□□ -1.26
Trim8Q99PJ2 Gm20627-202ENSMUST00000176275 564 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim8Q99PJ2 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Trim8Q99PJ2 Gm28011-201ENSMUST00000184097 175 ntBASIC7.16□□□□□ -1.26
Trim8Q99PJ2 Zfp572-202ENSMUST00000184208 1078 ntBASIC7.16□□□□□ -1.26
Trim8Q99PJ2 Gm29356-201ENSMUST00000186935 373 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 138.9 ms